Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG812_RS13195 Genome accession   NZ_CP107784
Coordinates   2841037..2842161 (+) Length   374 a.a.
NCBI ID   WP_161147461.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00566     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2836037..2847161
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG812_RS13180 (OG812_13170) - 2836765..2837583 (+) 819 WP_329013500.1 hypothetical protein -
  OG812_RS13185 (OG812_13175) - 2837591..2839303 (-) 1713 WP_330235737.1 hypothetical protein -
  OG812_RS13190 (OG812_13180) radA/sms 2839547..2840956 (+) 1410 WP_330235738.1 DNA repair protein RadA Machinery gene
  OG812_RS13195 (OG812_13185) disA 2841037..2842161 (+) 1125 WP_161147461.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG812_RS13200 (OG812_13190) - 2842307..2843125 (-) 819 WP_330235739.1 hypothetical protein -
  OG812_RS13205 (OG812_13195) - 2843307..2844182 (+) 876 WP_217465153.1 A/G-specific adenine glycosylase -
  OG812_RS13210 (OG812_13200) - 2844456..2844995 (+) 540 WP_217465152.1 SigE family RNA polymerase sigma factor -
  OG812_RS13215 (OG812_13205) - 2845031..2845636 (+) 606 WP_329013489.1 hypothetical protein -
  OG812_RS13220 (OG812_13210) cseB 2845673..2846377 (+) 705 WP_329013487.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40143.95 Da        Isoelectric Point: 4.9235

>NTDB_id=646202 OG812_RS13195 WP_161147461.1 2841037..2842161(+) (disA) [Streptomyces sp. NBC_00566]
MAANDRAAAPGKSGGSAGADGLMRASLSAVAPGTPLRDGLERVLRGNTGGLILLGWDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLEELIA
GVEPDRELVVRDYVPEPTAKRSRTVEEALFELDALSHAELLELGTVARGMGYTASPESLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=646202 OG812_RS13195 WP_161147461.1 2841037..2842161(+) (disA) [Streptomyces sp. NBC_00566]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTGCCGATGGCCTGATGCGCGCCTCTCT
GAGTGCCGTGGCTCCGGGCACCCCCCTGCGCGACGGTCTGGAGCGGGTCCTGCGCGGCAACACCGGCGGCCTGATCCTGC
TCGGCTGGGACAAGACGGTCGAGGCGATGTGCACCGGCGGTTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTCTCCTCGGACCTGTCGAAGATCCTGCGCGCCGGGGTCCAGCTCGTCCC
CGACCCGACCATCCCCACCGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGCGTCTCCAAGCAGGTCGGCTTCCCCG
TGGTCTCGGTGTCCCAGTCGATGCGGCTGATCGCGCTGTACGTCGACGGTCAGCGCCGGGTGCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTCCGCCTGGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCGGCGGTCGCGCAGCGCCTGGAGATGGTCCGGCGCATCG
CCACCGAGATCGCGGAGTACGTGGTCGAGCTGGGTACGGACGGCCGCCTGCTGGCGCTCCAGTTGGAGGAGCTGATCGCG
GGCGTCGAGCCCGACCGTGAGCTGGTCGTCCGGGACTATGTGCCCGAGCCGACCGCGAAGCGCTCGCGCACGGTGGAGGA
GGCTCTGTTCGAGCTGGACGCGCTGAGCCATGCGGAGCTGCTCGAACTGGGCACGGTGGCGCGGGGGATGGGGTACACCG
CGTCTCCCGAGTCGCTGGACTCGGCGGTGTCGCCGCGCGGGTTCCGGCTGCTGGCGAAGGTGCCCCGGCTGCCCGGTGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGTGGTCTGCAGAAGCTGCTCGCCGCCAGCGTGGATGATCTTCAGACCGTGGA
CGGGGTCGGGGAGGCCCGGGCTCGTAGCGTGCGGGAAGGGCTCTCGCGGCTGGCGGAGTCTTCCATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441