Detailed information NTG0064596

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: STRIC_RS09745
• Genome accession: NZ_AEUX02000007
• Coordinates: 402126..403049 (+)
• Length: 307 a.a.
• NCBI ID: WP_008090244.1
• Uniprot ID: G5K5C2
• Organism: Streptococcus ictaluri 707-05
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 397126..408049

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STRIC_RS09730 (STRIC_2013)	amiC	398641..400125 (+)	1485	WP_008090071.1	ABC transporter permease	Regulator
STRIC_RS09735 (STRIC_2014)	amiD	400128..401054 (+)	927	WP_008089700.1	oligopeptide ABC transporter permease OppC	Regulator
STRIC_RS09740 (STRIC_2015)	amiE	401063..402133 (+)	1071	WP_008089761.1	ABC transporter ATP-binding protein	Regulator
STRIC_RS09745 (STRIC_2016)	amiF	402126..403049 (+)	924	WP_008090244.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34667.89 Da
• Isoelectric Point: 7.5988

>NTDB_id=64596 STRIC_RS09745 WP_008090244.1 402126..403049(+) (amiF) [Streptococcus ictaluri 707-05]
MTDKLVEVKDLEISFGKGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNETSSGQIIYDGKVINGKRTRS
ENSDLIRKIQMIFQDPAASLNERATVDYIISEGLYNFKLFKDEDERKNKIKNMLTEVGLLPEHLTRYPHEFSGGQRQRIG
IARALVMDPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
HPIHPYTKSLLSAVPIPDPILERQKQLVVYNPDQHDYTEDKPSMVELKPGHFVWANQAEVEAYRKSI

Nucleotide

• Length: 924 bp

>NTDB_id=64596 STRIC_RS09745 WP_008090244.1 402126..403049(+) (amiF) [Streptococcus ictaluri 707-05]
ATGACTGATAAATTAGTCGAAGTAAAAGACCTAGAAATTTCCTTCGGTAAAGGAAAGAAAAAATTTGTTGCCGTTAAAAA
TGCCAATTTCTTTATCAAAAAAGGAGAAACATTCTCTTTAGTTGGTGAATCCGGAAGTGGTAAAACAACGATTGGCCGAG
CAATAATCGGACTCAATGAGACAAGCTCAGGACAAATCATCTATGATGGTAAGGTTATTAATGGAAAACGCACACGATCA
GAAAATAGTGATTTGATTCGTAAAATACAAATGATTTTTCAAGATCCTGCAGCCAGTCTTAATGAGCGTGCTACAGTTGA
TTACATCATTTCTGAGGGACTTTATAATTTTAAGTTGTTCAAAGATGAAGATGAGCGTAAAAATAAAATTAAAAATATGT
TGACAGAGGTTGGTCTGCTTCCTGAACATTTAACACGGTATCCACATGAGTTTTCAGGAGGTCAGCGTCAGCGTATTGGT
ATTGCAAGAGCTCTTGTTATGGATCCTGAGTTTGTGATTGCGGATGAGCCAATTTCAGCATTGGATGTTTCAGTTCGCGC
ACAGGTTTTAAACCTGCTAAAACGAATGCAGGCTGAAAAGGGGTTGACCTATCTTTTTATTGCGCATGATTTATCTGTTG
TTCGATTTATCTCAGACCGTATTGCCGTAATCCACAAAGGGGTGATTGTTGAAGTCGCAGAAACAGAAGAACTTTTTAAT
CATCCAATCCACCCTTATACTAAATCACTACTTTCAGCAGTTCCAATCCCGGATCCAATTTTAGAAAGACAAAAGCAACT
AGTGGTTTACAATCCTGATCAACATGATTATACAGAAGATAAGCCATCAATGGTTGAGTTAAAACCAGGACACTTTGTAT
GGGCAAACCAAGCAGAAGTCGAAGCTTATCGCAAATCTATTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

3D structure

• AlphaFold DB: G5K5C2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	81.639	99.349	0.811
amiF	Streptococcus thermophilus LMD-9	81.311	99.349	0.808
amiF	Streptococcus salivarius strain HSISS4	81.311	99.349	0.808