Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG852_RS21065 Genome accession   NZ_CP107772
Coordinates   4755265..4756389 (+) Length   374 a.a.
NCBI ID   WP_133910495.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00582     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4750265..4761389
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG852_RS21050 (OG852_21065) - 4750939..4751763 (+) 825 WP_133910492.1 hypothetical protein -
  OG852_RS21055 (OG852_21070) - 4751769..4753514 (-) 1746 WP_133910493.1 sigma-70 family RNA polymerase sigma factor -
  OG852_RS21060 (OG852_21075) radA/sms 4753774..4755183 (+) 1410 WP_133910494.1 DNA repair protein RadA Machinery gene
  OG852_RS21065 (OG852_21080) disA 4755265..4756389 (+) 1125 WP_133910495.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG852_RS21070 (OG852_21085) - 4756406..4757239 (-) 834 WP_330348672.1 hypothetical protein -
  OG852_RS21075 (OG852_21090) - 4757504..4758427 (+) 924 WP_133910496.1 A/G-specific adenine glycosylase -
  OG852_RS21080 (OG852_21095) - 4758731..4759273 (+) 543 WP_067256344.1 SigE family RNA polymerase sigma factor -
  OG852_RS21085 (OG852_21100) - 4759258..4759944 (+) 687 WP_133910497.1 hypothetical protein -
  OG852_RS21090 (OG852_21105) cseB 4760155..4760853 (+) 699 WP_133910498.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40069.80 Da        Isoelectric Point: 5.0092

>NTDB_id=645952 OG852_RS21065 WP_133910495.1 4755265..4756389(+) (disA) [Streptomyces sp. NBC_00582]
MAANDRAAAPGKSGGSSRAEGLMRAALSAVAPGTALRDGLERVLRGNTGGLIVLGSDKTVETMCTGGFVLDVEFTATRLR
ELCKLDGGIVVSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALSELDALTHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=645952 OG852_RS21065 WP_133910495.1 4755265..4756389(+) (disA) [Streptomyces sp. NBC_00582]
GTGGCAGCCAACGACCGGGCGGCAGCTCCCGGAAAGTCCGGTGGGAGTTCCCGTGCCGAGGGCCTGATGCGCGCCGCGCT
GAGCGCGGTGGCTCCGGGCACCGCCCTGCGCGACGGGCTCGAGCGGGTGCTCCGCGGCAACACCGGCGGGCTCATCGTGC
TCGGCTCCGACAAGACCGTCGAGACGATGTGTACGGGCGGGTTCGTCCTGGACGTCGAGTTCACCGCGACCCGGCTGCGG
GAGCTGTGCAAGCTCGACGGCGGCATCGTGGTCTCCTCCGACCTGTCGAAGATCCTGCGCGCCGGCGTCCAGCTCGTCCC
GGACCCCACGATCCCCACGGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGTGTCTCCAAGCAGGTCGGCTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCCCTGTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCCCTCGCCACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTGGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCCGCGGTGGCCCAGCGCCTGGAGATGGTGCGCAGGATCG
CCACCGAGATCGCCGAGTACGTGGTCGAACTGGGCACCGACGGGCGTCTGCTGGCCCTCCAGCTCGACGAGCTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTGGTCCGGGACTACGTGCCCGAGCCCACCGCCAAGCGTTCCCGCACGGTCGACGA
GGCGCTGTCCGAGCTGGACGCCCTCACCCATGCCGAGCTGCTCGAACTGTCCACGGTGGCGCGCGCGTTGGGCTACACCG
GTTCGCCCGAGGCCCTCGACTCGGCGGTCTCGCCGCGTGGCTTCCGCCTCCTGGCCAAGGTTCCCCGCCTGCCCGGCGCC
ATCATCGACCGCCTGGTGGAACACTTCGGCGGACTTCAGAAGCTCCTCGCCGCCAGCGTCGACGACCTCCAGACGGTCGA
CGGCGTGGGCGAGGCCCGGGCCCGCAGCGTCCGCGAGGGACTGTCGCGCCTGGCGGAGTCGTCGATCCTCGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438