Detailed information NTG0064589

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: STRIC_RS09150
• Genome accession: NZ_AEUX02000007
• Coordinates: 287946..288992 (+)
• Length: 348 a.a.
• NCBI ID: WP_008090184.1
• Uniprot ID: G5K4Z2
• Organism: Streptococcus ictaluri 707-05
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 282946..293992

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STRIC_RS09135 (STRIC_1876)	-	284176..285834 (+)	1659	WP_008090345.1	peptide ABC transporter substrate-binding protein	-
STRIC_RS09140 (STRIC_1877)	-	285979..286893 (+)	915	WP_008090077.1	ABC transporter permease	-
STRIC_RS09145 (STRIC_1878)	-	286903..287934 (+)	1032	WP_008090116.1	ABC transporter permease	-
STRIC_RS09150 (STRIC_1879)	oppD	287946..288992 (+)	1047	WP_008090184.1	ABC transporter ATP-binding protein	Regulator
STRIC_RS09155 (STRIC_1880)	amiF	288992..289924 (+)	933	WP_008090050.1	ABC transporter ATP-binding protein	Regulator
STRIC_RS09160 (STRIC_1881)	rnjA	290018..291697 (-)	1680	WP_008090114.1	ribonuclease J1	-
STRIC_RS09165 (STRIC_1882)	-	291699..291929 (-)	231	WP_008090337.1	DNA-dependent RNA polymerase subunit epsilon	-
STRIC_RS09170 (STRIC_1883)	tsaB	292287..292985 (+)	699	WP_008090405.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
STRIC_RS09175 (STRIC_1884)	rimI	292988..293413 (+)	426	WP_008089645.1	ribosomal protein S18-alanine N-acetyltransferase	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38512.13 Da
• Isoelectric Point: 4.9368

>NTDB_id=64589 STRIC_RS09150 WP_008090184.1 287946..288992(+) (oppD) [Streptococcus ictaluri 707-05]
MTEEIILDVKNLHVDFKTYAGDVKAIRDIHFTLKKGETLAIVGESGSGKSVTTRTLMGLNAKNATISGEINFKGKRLDAL
KEEEWVKLRGNEIAMIFQDPMTSLDPTMKIGMQIAEAILIHQKISKKEALERALELMTQVGIPNAEEHINDYPHQWSGGM
RQRAVIAIALAANPEILIADEPTTALDVTIQAQILKLMKDIQANTSSSIIFITHDLGVVAGMADRVAVMYAGEIVEYGTV
DEVFYNPQHPYTWGLLNSMPTTDTEAGSLESIPGTPPDLLNPPKGDAFAARNEFALDIDHVEEPPMFKVSDNHYAATWLL
DERAPQVTPPLQIQKRWAKWQRMKGGEA

Nucleotide

• Length: 1047 bp

>NTDB_id=64589 STRIC_RS09150 WP_008090184.1 287946..288992(+) (oppD) [Streptococcus ictaluri 707-05]
ATGACAGAAGAAATAATTTTAGATGTTAAAAACCTCCACGTTGATTTTAAAACCTATGCTGGAGACGTTAAAGCCATTCG
AGATATTCATTTTACCTTAAAAAAAGGGGAAACCTTGGCTATTGTAGGTGAGTCTGGCTCTGGAAAATCAGTGACCACGC
GTACCTTGATGGGCTTGAATGCTAAAAATGCAACTATTTCTGGTGAAATCAACTTTAAGGGCAAACGTTTAGATGCTCTA
AAAGAAGAAGAATGGGTCAAATTACGAGGCAATGAGATTGCCATGATTTTTCAAGATCCTATGACCAGTCTAGATCCTAC
CATGAAAATTGGCATGCAGATTGCAGAAGCCATTCTCATTCATCAAAAGATTTCCAAAAAAGAAGCTTTAGAGCGCGCCT
TGGAATTGATGACACAAGTTGGGATTCCAAATGCTGAGGAACATATCAATGATTACCCTCACCAATGGTCAGGTGGGATG
AGACAGCGTGCTGTTATTGCCATTGCACTAGCAGCTAACCCTGAAATCTTAATCGCTGATGAGCCAACTACAGCTTTGGA
TGTGACCATTCAAGCACAGATTCTGAAGTTGATGAAAGACATTCAAGCCAATACTTCCTCGTCCATTATTTTTATCACCC
ATGATTTAGGGGTGGTGGCTGGTATGGCAGACCGTGTAGCGGTGATGTATGCTGGTGAAATTGTTGAATATGGAACCGTT
GATGAAGTCTTTTATAATCCGCAACATCCTTACACATGGGGATTGTTAAACTCAATGCCAACAACCGATACAGAAGCAGG
AAGCTTGGAATCTATTCCTGGAACACCGCCGGATTTATTGAACCCACCTAAAGGAGACGCTTTTGCGGCTCGTAACGAAT
TTGCTTTGGATATTGACCATGTAGAGGAACCTCCAATGTTTAAAGTTAGTGATAATCATTACGCAGCTACTTGGTTACTT
GATGAGCGTGCACCACAGGTCACTCCGCCTTTACAAATTCAAAAACGATGGGCCAAGTGGCAAAGAATGAAAGGAGGCGA
GGCTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

3D structure

• AlphaFold DB: G5K4Z2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.71	99.138	0.79
amiE	Streptococcus salivarius strain HSISS4	55.917	97.126	0.543
amiE	Streptococcus thermophilus LMG 18311	55.621	97.126	0.54
amiE	Streptococcus thermophilus LMD-9	55.621	97.126	0.54