Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHN38_RS22215 Genome accession   NZ_CP107765
Coordinates   4823059..4824183 (-) Length   374 a.a.
NCBI ID   WP_037783437.1    Uniprot ID   A0ABS9XEE7
Organism   Streptomyces sp. NBC_00588     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4818059..4829183
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHN38_RS22190 (OHN38_22175) cseB 4818834..4819538 (-) 705 WP_016437460.1 two-component system response regulator CseB -
  OHN38_RS22195 (OHN38_22180) - 4819626..4820273 (-) 648 WP_016437461.1 lipoprotein CseA -
  OHN38_RS22200 (OHN38_22185) - 4820261..4820800 (-) 540 WP_016437462.1 SigE family RNA polymerase sigma factor -
  OHN38_RS22205 (OHN38_22190) - 4821041..4821976 (-) 936 WP_330283063.1 A/G-specific adenine glycosylase -
  OHN38_RS22210 (OHN38_22195) - 4822144..4822998 (+) 855 WP_330283064.1 hypothetical protein -
  OHN38_RS22215 (OHN38_22200) disA 4823059..4824183 (-) 1125 WP_037783437.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHN38_RS22220 (OHN38_22205) radA 4824265..4825674 (-) 1410 WP_016437466.1 DNA repair protein RadA Machinery gene
  OHN38_RS22225 (OHN38_22210) - 4825891..4827585 (+) 1695 WP_330283065.1 hypothetical protein -
  OHN38_RS22230 (OHN38_22215) - 4827880..4828674 (-) 795 WP_037783536.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40118.84 Da        Isoelectric Point: 4.9201

>NTDB_id=645875 OHN38_RS22215 WP_037783437.1 4823059..4824183(-) (disA) [Streptomyces sp. NBC_00588]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERVLRGNTGGLVVLGFDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGGIVLNSDLSKILRAGVQFLPDATIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALNELDALTHAELLELPTVARALGYTGAPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=645875 OHN38_RS22215 WP_037783437.1 4823059..4824183(-) (disA) [Streptomyces sp. NBC_00588]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAATCCGGTGGGAGTTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCTCCCGGCACGGCATTGCGCGACGGGCTCGAGCGGGTACTCCGCGGCAACACCGGCGGTCTCGTCGTGC
TCGGCTTCGACAAGACCGTCGAGTCCATGTGCACCGGCGGCTTCGTGCTGGACGTCGAGTTCACGGCCACCCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTGAACTCCGACCTGTCGAAGATCCTGCGGGCGGGCGTGCAGTTCCTGCC
CGACGCGACGATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCGG
TCGTCTCGGTGTCGCAGTCCATGCGCCTGATCGCGCTCTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCCGCGGCG
ATCCTCTCTCGCGCCAACCAGGCCCTCGCGACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCGGCGGTGGCCCAGCGCCTCGAGATGGTCCGCCGTATCG
CCACCGAAATCGCTGAATACGTGGTCGAACTGGGCACGGACGGCCGCCTGCTGGCCCTGCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCCGAGCGCGAACTGGTGGTCCGGGACTACGTCCCCGAGCCCACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCGCTCAACGAACTGGATGCCCTCACCCACGCCGAGCTCCTGGAACTGCCCACGGTGGCAAGGGCGTTGGGTTACACGG
GAGCCCCGGAGACGCTGGACTCCGCGGTCTCGCCGCGCGGCTTCCGGCTGCTGGCCAAGGTGCCGCGGCTGCCGGGCGCC
ATCATCGACCGTCTCGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCCAGCGTCGACGACCTGCAGACCGTCGA
CGGCGTCGGCGAGGCCCGGGCGCGCAGCGTGCGCGAGGGCCTGTCGAGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436