Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   L1A15_RS09175 Genome accession   NZ_CP090884
Coordinates   1765547..1766167 (-) Length   206 a.a.
NCBI ID   WP_000839908.1    Uniprot ID   A0A0B7M636
Organism   Streptococcus pneumoniae strain MD5403     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1760547..1771167
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L1A15_RS09150 (L1A15_09150) recA 1760924..1762090 (-) 1167 WP_001085463.1 recombinase RecA Machinery gene
  L1A15_RS09155 (L1A15_09155) cinA 1762145..1763401 (-) 1257 WP_000642709.1 competence/damage-inducible protein A Machinery gene
  L1A15_RS09160 (L1A15_09160) - 1763486..1764502 (-) 1017 WP_000239282.1 LCP family protein -
  L1A15_RS09165 (L1A15_09165) - 1764510..1765028 (-) 519 WP_000455537.1 GNAT family N-acetyltransferase -
  L1A15_RS09170 (L1A15_09170) tsaE 1765018..1765461 (-) 444 WP_000288232.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  L1A15_RS09175 (L1A15_09175) comM 1765547..1766167 (-) 621 WP_000839908.1 hypothetical protein Regulator
  L1A15_RS09180 (L1A15_09180) - 1766550..1767413 (-) 864 WP_061363737.1 helix-turn-helix transcriptional regulator -
  L1A15_RS10470 - 1767602..1767772 (+) 171 WP_000742180.1 PhrA family quorum-sensing system peptide -
  L1A15_RS09185 (L1A15_09185) - 1768222..1770237 (+) 2016 WP_000732398.1 DUF1430 domain-containing protein -
  L1A15_RS09190 (L1A15_09190) - 1770239..1770871 (+) 633 WP_000571415.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23552.72 Da        Isoelectric Point: 10.1254

>NTDB_id=645786 L1A15_RS09175 WP_000839908.1 1765547..1766167(-) (comM) [Streptococcus pneumoniae strain MD5403]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKKSVKLFYSMLLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYVRDFLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLIYIGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIVTLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=645786 L1A15_RS09175 WP_000839908.1 1765547..1766167(-) (comM) [Streptococcus pneumoniae strain MD5403]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCCTATGGAAGGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGCATGGTTTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACTCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGAAGTCGGTGAAGCTTTTTTACAGTATGTTACTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTTTTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTCTTTTTCCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACGTGCGCGATTTTC
TTGCTATGCTGGACAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTTTTCTTAAGAAATCCAATGACCATT
GTCTCACTTCTGATTTATATTGGACTGGGCTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGTTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0B7M636

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

100

100

1
  comM Streptococcus pneumoniae R6

100

100

1
  comM Streptococcus pneumoniae TIGR4

100

100

1
  comM Streptococcus mitis NCTC 12261

38.974

94.66

0.369
  comM Streptococcus mitis SK321

38.974

94.66

0.369