Detailed information NTG0645753

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHA51_RS17910
• Genome accession: NZ_CP107764
• Coordinates: 3963292..3964578 (-)
• Length: 428 a.a.
• NCBI ID: WP_330304562.1
• Uniprot ID: A0ABW2VPP3
• Organism: Streptomyces sp. NBC_00589
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3958292..3969578

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA51_RS17895 (OHA51_17895)	-	3959055..3961679 (-)	2625	WP_330304559.1	valine--tRNA ligase	-
OHA51_RS17900 (OHA51_17900)	-	3961816..3962754 (+)	939	WP_330304560.1	hypothetical protein	-
OHA51_RS17905 (OHA51_17905)	-	3962829..3963113 (-)	285	WP_330304561.1	hypothetical protein	-
OHA51_RS17910 (OHA51_17910)	clpX	3963292..3964578 (-)	1287	WP_330304562.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHA51_RS17915 (OHA51_17915)	clpP	3964739..3965419 (-)	681	WP_330304563.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA51_RS17920 (OHA51_17920)	clpP	3965526..3966131 (-)	606	WP_330310095.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA51_RS17925 (OHA51_17925)	tig	3966573..3967973 (-)	1401	WP_330304564.1	trigger factor	-
OHA51_RS17940 (OHA51_17940)	-	3968603..3969109 (-)	507	WP_330304565.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 47010.83 Da
• Isoelectric Point: 4.8249

>NTDB_id=645753 OHA51_RS17910 WP_330304562.1 3963292..3964578(-) (clpX) [Streptomyces sp. NBC_00589]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENSTGQNRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKLIESRAGAKGIGFGATIRSKRELQSKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVHSNVNPTLIPRDARRGGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=645753 OHA51_RS17910 WP_330304562.1 3963292..3964578(-) (clpX) [Streptomyces sp. NBC_00589]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTTCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTCGGCCAGGAGCCG
GCCAAGAAGGCGCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACAGCACGGGTCAAAACCG
CGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTGCTGCTCGGCCCCACGGGCTCGGGCAAGACGCTCCTGGCCCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGTTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTCATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGATGTGTCCGGCGAGGGCGTCCAACAGGCCC
TGCTGAAGATCCTCGAAGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGCTCATCGAGTCCCGCGCCGGCGC
GAAGGGTATCGGCTTCGGTGCGACGATCCGCTCGAAGCGGGAGCTGCAGTCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTGATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAACTCGACTTCGAGCGCGAGGCGTTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGAGCGCGAGGCCTGC
GCGCCATCATGGAGGAAGTCCTCATGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCGGACGTCGTTCACTCGAACGTGAACCCGACGCTGATTCCGCGGGACGCTCGCCGCGGGGGGCCGGGGGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521