Detailed information NTG0645685

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG974_RS16230
• Genome accession: NZ_CP107757
• Coordinates: 3643225..3644511 (-)
• Length: 428 a.a.
• NCBI ID: WP_030297265.1
• Uniprot ID: A0ABN0VAM4
• Organism: Streptomyces sp. NBC_00597
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3638225..3649511

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG974_RS16220 (OG974_16225)	-	3639417..3642038 (-)	2622	WP_327283421.1	valine--tRNA ligase	-
OG974_RS16225 (OG974_16230)	-	3642168..3643112 (+)	945	WP_327283422.1	hypothetical protein	-
OG974_RS16230 (OG974_16235)	clpX	3643225..3644511 (-)	1287	WP_030297265.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG974_RS16235 (OG974_16240)	clpP	3644665..3645336 (-)	672	WP_323179072.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG974_RS16240 (OG974_16245)	clpP	3645423..3646040 (-)	618	WP_327283423.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG974_RS16245 (OG974_16250)	tig	3646373..3647755 (-)	1383	WP_327283424.1	trigger factor	-
OG974_RS16260 (OG974_16265)	-	3648349..3648848 (+)	500	Protein_3216	replication initiator	-
OG974_RS16265 (OG974_16270)	-	3648841..3649041 (+)	201	WP_327283425.1	excisionase family DNA-binding protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46909.81 Da
• Isoelectric Point: 4.7271

>NTDB_id=645685 OG974_RS16230 WP_030297265.1 3643225..3644511(-) (clpX) [Streptomyces sp. NBC_00597]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVRSNVNPTLVPRIVPKDQGPQEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=645685 OG974_RS16230 WP_030297265.1 3643225..3644511(-) (clpX) [Streptomyces sp. NBC_00597]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTCCGGTGGGAGGAACTCCCCAAGCCTCGCGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCGGTGGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
TGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTGCTGCTGGGCCCGACGGGCTCCGGCAAGACGCTGCTCGCCCAAA
CGCTCGCGCGCATGCTCAACGTCCCGTTCGCCATCGCTGACGCGACGGCGCTGACGGAGGCCGGGTACGTGGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGTGAGGGCGTGCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACGACGGCTTCGGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGTGCGGGCGC
CAAGGGCATCGGCTTCGGGGCGACGATCCGCTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGTCTGCCCGTCATCACTTCGGTGCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTGGTGGAGCCGCGGAACGCGCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGCGT
CGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCGGACCAGGCGATCCTCCGCCAGACGGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACG
GCGGACGTCGTCCGCTCGAACGTCAACCCGACGCTGGTCCCGCGCATCGTCCCGAAGGACCAGGGCCCGCAGGAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.925	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	96.028	0.519