Detailed information    

insolico Bioinformatically predicted

Overview


Name   comE/blpR   Type   Regulator
Locus tag   L1A14_RS02725 Genome accession   NZ_CP090883
Coordinates   517422..518159 (+) Length   245 a.a.
NCBI ID   WP_001219127.1    Uniprot ID   A0A4J1ZS24
Organism   Streptococcus pneumoniae strain LE4448     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 512422..523159
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L1A14_RS02690 (L1A14_02690) - 513398..513592 (-) 195 WP_001808905.1 hypothetical protein -
  L1A14_RS02695 (L1A14_02695) - 513754..514041 (-) 288 WP_000777760.1 hypothetical protein -
  L1A14_RS02700 (L1A14_02700) - 514051..514461 (-) 411 WP_001278301.1 HIT family protein -
  L1A14_RS02705 (L1A14_02705) pptA 514529..515260 (+) 732 WP_000889923.1 ABC transporter ATP-binding protein Regulator
  L1A14_RS02710 (L1A14_02710) - 515257..516306 (+) 1050 WP_000653752.1 ABC transporter permease -
  L1A14_RS02715 (L1A14_02715) - 516474..516803 (-) 330 WP_000132570.1 hypothetical protein -
  L1A14_RS02720 (L1A14_02720) - 517079..517417 (+) 339 WP_000682119.1 LytTR family DNA-binding domain-containing protein -
  L1A14_RS02725 (L1A14_02725) comE/blpR 517422..518159 (+) 738 WP_001219127.1 response regulator transcription factor Regulator
  L1A14_RS02730 (L1A14_02730) - 518173..519513 (+) 1341 WP_001017622.1 sensor histidine kinase -
  L1A14_RS02735 (L1A14_02735) blpC 519555..519710 (-) 156 WP_000358813.1 quorum-sensing system pheromone BlpC -
  L1A14_RS02740 (L1A14_02740) - 519767..521128 (-) 1362 WP_001069092.1 bacteriocin secretion accessory protein -
  L1A14_RS10505 comA/nlmT 521139..521627 (-) 489 WP_307774349.1 ATP-binding cassette domain-containing protein Regulator
  L1A14_RS10510 comA/nlmT 521611..522051 (-) 441 WP_001808911.1 ATP-binding cassette domain-containing protein Regulator
  L1A14_RS10515 comA/nlmT 522041..522766 (-) 726 WP_167750760.1 ABC transporter transmembrane domain-containing protein Regulator

Sequence


Protein


Download         Length: 245 a.a.        Molecular weight: 28683.81 Da        Isoelectric Point: 6.0431

>NTDB_id=645671 L1A14_RS02725 WP_001219127.1 517422..518159(+) (comE/blpR) [Streptococcus pneumoniae strain LE4448]
MRIFVLEDDFSQQTRIETTIEKLLKAHHIIPSSFEVFGKPDQLLAEVHEKGAHQLFFLDIEIRNEEMKGLEVARKIREQD
PYALIVFVTTHSEFMPLSFRYQVSALDYIDKALSAEEFESRIETALLYANSQDSKSLAEDCFYFKSKFAQFQYPFKEVYY
LETSPRPHRVILYTKTDRLEFTASLEEVFKQEPSLLQCHRSFLINPANVVHLDKKEKLLFFPNGGSCLIARYKVREVSEA
INNLH

Nucleotide


Download         Length: 738 bp        

>NTDB_id=645671 L1A14_RS02725 WP_001219127.1 517422..518159(+) (comE/blpR) [Streptococcus pneumoniae strain LE4448]
ATGAGAATATTTGTTTTAGAAGATGATTTTTCCCAACAGACTAGAATTGAAACGACGATTGAGAAACTTTTGAAAGCACA
TCATATCATTCCTAGCTCTTTTGAGGTATTTGGCAAGCCGGACCAACTGCTGGCAGAGGTACATGAGAAGGGGGCCCATC
AGCTATTCTTTTTGGATATTGAGATTCGAAATGAAGAGATGAAGGGACTGGAAGTAGCTAGAAAGATTCGGGAACAAGAC
CCTTATGCCCTAATCGTCTTTGTGACGACTCACTCGGAGTTTATGCCTCTGTCCTTTCGCTACCAAGTGTCAGCTTTGGA
CTACATTGATAAGGCCCTTTCGGCAGAGGAGTTTGAATCTCGTATCGAGACAGCCCTCCTCTATGCCAATAGTCAAGATA
GTAAAAGTCTGGCGGAAGATTGCTTTTACTTTAAATCAAAATTTGCCCAATTCCAATATCCTTTCAAAGAGGTTTACTAT
CTCGAAACATCCCCAAGACCCCATCGTGTTATTCTCTATACCAAGACGGACAGGCTAGAATTTACGGCGAGTTTAGAGGA
GGTTTTTAAGCAGGAACCCAGTCTCTTGCAGTGCCATCGCTCTTTTCTCATCAATCCTGCAAATGTGGTGCATTTGGATA
AGAAAGAAAAACTCCTTTTCTTTCCCAATGGTGGAAGCTGTCTGATCGCGCGTTATAAGGTCAGGGAAGTGTCTGAGGCT
ATTAATAACTTACACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4J1ZS24

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

53.498

99.184

0.531

  comE/comE1 Streptococcus equinus JB1

43.46

96.735

0.42

  comE/comE2 Streptococcus equinus JB1

38.843

98.776

0.384