Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SPB_RS08390 Genome accession   NZ_AEUT02000001
Coordinates   1676572..1677831 (-) Length   419 a.a.
NCBI ID   WP_003104692.1    Uniprot ID   F1YZK2
Organism   Streptococcus parauberis NCFD 2020     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1671572..1682831
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPB_RS08380 (SPB_1730) - 1673753..1674562 (-) 810 WP_003102403.1 DUF975 family protein -
  SPB_RS08385 (SPB_1731) - 1674692..1676548 (-) 1857 WP_003105719.1 proline--tRNA ligase -
  SPB_RS08390 (SPB_1732) eeP 1676572..1677831 (-) 1260 WP_003104692.1 RIP metalloprotease RseP Regulator
  SPB_RS08395 (SPB_1733) - 1677860..1678654 (-) 795 WP_003104075.1 phosphatidate cytidylyltransferase -
  SPB_RS08400 (SPB_1734) - 1678672..1679421 (-) 750 WP_003103317.1 isoprenyl transferase -
  SPB_RS08405 (SPB_1735) yajC 1679590..1679976 (-) 387 WP_003106024.1 preprotein translocase subunit YajC -
  SPB_RS08410 (SPB_1736) - 1680047..1680391 (-) 345 WP_003103525.1 thioredoxin domain-containing protein -
  SPB_RS08415 (SPB_1737) galE 1680492..1681487 (-) 996 WP_003102432.1 UDP-glucose 4-epimerase GalE -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 46179.01 Da        Isoelectric Point: 9.4048

>NTDB_id=64563 SPB_RS08390 WP_003104692.1 1676572..1677831(-) (eeP) [Streptococcus parauberis NCFD 2020]
MLGLFTFIIIFGILVIVHEFGHFYFAKKSGILVREFAIGMGPKIFSQVDKEGTLYTIRILPLGGYVRMAGWGDDTTEIKT
GTPVTLTLNEQGLVKRINLSQNKIDPTSLPMNVTAYDLEDKLEITGLVIDERKTYAVDHDATIVEEDGTEIRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGLVVFIVLAFVQGGVPDYNSNQIRVVDNGPAAKAGIKSDDQIIKINQYPVKNWEDLTQ
AVQQSTQKLADNQSLQVTTLSHGKKKIVNLKPQKNGKQYIIGVQTKIKTSLKDKIVGGFEMSVRGALLIITALKNLITGF
SLDKLGGPVAMYQMSNQAANSGIESVLSLMAMLSINLGIFNLIPIPALDGGKIFINLIEAIRRKPLKQETESYITLAGVA
IMVLLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=64563 SPB_RS08390 WP_003104692.1 1676572..1677831(-) (eeP) [Streptococcus parauberis NCFD 2020]
ATGTTAGGTTTATTTACCTTTATTATCATCTTTGGAATATTAGTCATTGTCCATGAATTTGGACATTTCTATTTTGCAAA
GAAGTCTGGTATTTTAGTTCGTGAGTTTGCAATAGGGATGGGTCCGAAAATCTTTTCACAAGTTGACAAAGAAGGTACCC
TTTACACTATTCGTATTTTACCTTTAGGTGGTTATGTTCGCATGGCCGGCTGGGGTGATGACACAACTGAAATAAAAACT
GGAACACCGGTCACTTTGACCTTGAATGAACAAGGGCTGGTTAAACGAATTAACTTATCTCAAAATAAGATTGATCCAAC
AAGTTTGCCTATGAATGTGACCGCTTATGACTTAGAAGATAAGCTTGAAATCACAGGATTGGTGATTGATGAACGCAAAA
CCTATGCGGTTGATCATGACGCAACAATTGTTGAAGAAGACGGCACAGAAATTCGCATCGCCCCCAAAGATGTTCAGTAT
CAAAATGCTAGCATCTGGGGAAGATTGATCACGAACTTTGCTGGCCCGATGAACAACTTCATACTTGGCTTGGTCGTCTT
CATCGTCTTAGCCTTCGTTCAAGGCGGTGTTCCTGACTATAATTCAAATCAGATCCGTGTTGTGGACAATGGCCCTGCTG
CCAAAGCTGGGATTAAATCTGATGATCAAATTATCAAAATCAATCAGTACCCTGTTAAAAATTGGGAAGATTTAACACAA
GCTGTTCAACAGTCAACCCAAAAATTAGCAGACAATCAAAGCTTGCAAGTGACAACGCTGTCGCATGGCAAGAAAAAAAT
AGTTAACTTAAAACCCCAAAAGAATGGCAAACAATATATCATTGGTGTTCAGACCAAGATAAAAACAAGTCTCAAAGATA
AAATTGTTGGTGGCTTTGAAATGTCTGTTCGCGGAGCTTTGTTAATTATTACAGCACTGAAAAATTTAATCACAGGTTTT
AGTCTTGATAAATTAGGTGGGCCCGTGGCCATGTACCAAATGTCTAATCAGGCTGCTAATAGTGGCATTGAGTCAGTGTT
ATCTTTAATGGCTATGCTATCAATCAACCTTGGAATCTTTAATTTAATCCCGATTCCAGCACTTGACGGTGGTAAAATTT
TCATCAACTTAATTGAAGCTATTCGTCGGAAACCACTGAAACAAGAAACTGAATCTTATATTACGCTTGCAGGTGTTGCA
ATTATGGTCTTATTGATGATTGCAGTAACTTGGAACGATATTATGCGTGCTTTTTTCTAA

Domains


Predicted by InterproScan.

(6-405)

(205-247)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB F1YZK2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

68.571

100

0.687

  eeP Streptococcus thermophilus LMD-9

68.333

100

0.685


Multiple sequence alignment