Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   L1A12_RS09085 Genome accession   NZ_CP090882
Coordinates   1781101..1782138 (-) Length   345 a.a.
NCBI ID   WP_000727277.1    Uniprot ID   A0A0B7LHQ0
Organism   Streptococcus pneumoniae strain CH2241     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1776101..1787138
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L1A12_RS09060 (L1A12_09060) - 1776840..1778171 (-) 1332 WP_000390039.1 hemolysin family protein -
  L1A12_RS09065 (L1A12_09065) endA 1778462..1779286 (-) 825 WP_001036787.1 DNA-entry nuclease EndA Machinery gene
  L1A12_RS09070 (L1A12_09070) - 1779325..1779513 (-) 189 WP_001813390.1 DNA-directed RNA polymerase subunit beta -
  L1A12_RS09075 (L1A12_09075) murA 1779506..1780789 (-) 1284 WP_000358028.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  L1A12_RS09080 (L1A12_09080) - 1780813..1781043 (-) 231 WP_000250384.1 DUF1146 family protein -
  L1A12_RS09085 (L1A12_09085) sepM 1781101..1782138 (-) 1038 WP_000727277.1 SepM family pheromone-processing serine protease Regulator
  L1A12_RS09090 (L1A12_09090) coaD 1782122..1782610 (-) 489 WP_001280769.1 pantetheine-phosphate adenylyltransferase -
  L1A12_RS09095 (L1A12_09095) rsmD 1782600..1783139 (-) 540 WP_000706963.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  L1A12_RS09100 (L1A12_09100) asnA 1783204..1784196 (-) 993 WP_000747993.1 aspartate--ammonia ligase -
  L1A12_RS09105 (L1A12_09105) - 1784308..1784991 (-) 684 WP_001016910.1 Bax inhibitor-1/YccA family protein -
  L1A12_RS09110 (L1A12_09110) - 1785047..1785787 (-) 741 WP_000152678.1 RNA methyltransferase -
  L1A12_RS09115 (L1A12_09115) - 1785821..1786099 (+) 279 WP_001174613.1 acylphosphatase -
  L1A12_RS09120 (L1A12_09120) yidC 1786177..1787103 (+) 927 WP_000835941.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37537.57 Da        Isoelectric Point: 5.0724

>NTDB_id=645625 L1A12_RS09085 WP_000727277.1 1781101..1782138(-) (sepM) [Streptococcus pneumoniae strain CH2241]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYFGVYVLNVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVSSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVISNVPISFSTAGIGGPSAGLMFSL
AIYTQIAHPDLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASARAGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=645625 L1A12_RS09085 WP_000727277.1 1781101..1782138(-) (sepM) [Streptococcus pneumoniae strain CH2241]
ATGAAAAAAAAGATTAGATGGCCCTTATACGTCATTGCGGCCTTGATTGTGACCTTCTTGGCATTTGTAGTGCCCTTGCC
TTATTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTAAATGACACAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTTCAACATGCCACTTTAGCTCATATGATTTATGCTTGGTTGACACCTTTTACA
GATATTCGTAGTGCTCAGGAGACTACAGGTGGTTCTTCCGATGTTGAATTTATGCGAATCAATCAATTCTACATGCAAAC
ATCACAAAATATGGCCAAGTATCAAGGACTAAAAACAGCTGGTAAGGATATCGAACTCAAGTACTTTGGAGTTTATGTTT
TGAATGTGACGGATAATTCAACCTTTAAAGGGATTCTCAATATCTCTGATACAGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGACTTGATTGATTACGTCAGTTCTCAAAAATTAGGGGATTCCGTCAAGGTCACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGAAAAATCATCACCTTGGAAAATGGCAAAAATGGAATTGGAATCGGCTTGATTGACCGTA
CAGAGGTAATCAGCAATGTCCCAATTAGCTTTTCAACAGCTGGTATTGGCGGTCCAAGTGCTGGTCTCATGTTTAGTCTA
GCTATCTATACTCAAATAGCTCACCCAGATCTTCGTAATGGTCGTATTGTTGCCGGTACAGGTACCATTGACCGCGATGG
TAATGTGGGAGACATTGGAGGTATTGATAAGAAGGTTGTAGCTTCGGCTAGGGCAGGTGCTGCTATTTTCTTTGCTCCTG
ATAACCCTGTTAGCGAAGAAGAACAAAAGGCGCATCCGGACGCGAAAAACAACTACCAAACAGCCCTAGAAGCGGCTAAA
ACAATCAAGACGGATATGAAAATCGTGCCCGTTAAAACCCTACAAGATGCGATTGATTACTTGAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7LHQ0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.649

99.13

0.591