Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   L0998_RS01325 Genome accession   NZ_CP090876
Coordinates   276704..277747 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain SAUR_BFS12     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 271704..282747
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L0998_RS01295 (L0998_01295) - 271765..271875 (+) 111 WP_001790257.1 hypothetical protein -
  L0998_RS01300 (L0998_01300) - 271904..272317 (+) 414 WP_077446671.1 hypothetical protein -
  L0998_RS01305 (L0998_01305) - 272826..273812 (-) 987 WP_054189634.1 FUSC family protein -
  L0998_RS01310 (L0998_01310) map 274630..275388 (+) 759 WP_000636142.1 type I methionyl aminopeptidase -
  L0998_RS01315 (L0998_01315) - 275605..275991 (+) 387 WP_001110179.1 hypothetical protein -
  L0998_RS01320 (L0998_01320) liaF 276006..276707 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  L0998_RS01325 (L0998_01325) vraS 276704..277747 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  L0998_RS01330 (L0998_01330) vraR 277737..278366 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  L0998_RS01335 (L0998_01335) - 278476..279693 (-) 1218 WP_000037088.1 YihY/virulence factor BrkB family protein -
  L0998_RS01340 (L0998_01340) - 279971..280246 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  L0998_RS01345 (L0998_01345) - 280253..280717 (-) 465 WP_054189636.1 low molecular weight protein-tyrosine-phosphatase -
  L0998_RS01350 (L0998_01350) - 280864..281064 (+) 201 WP_000180460.1 DUF1128 family protein -
  L0998_RS01355 (L0998_01355) - 281067..282323 (+) 1257 WP_077446664.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=645376 L0998_RS01325 WP_001017131.1 276704..277747(+) (vraS) [Staphylococcus aureus strain SAUR_BFS12]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=645376 L0998_RS01325 WP_001017131.1 276704..277747(+) (vraS) [Staphylococcus aureus strain SAUR_BFS12]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTTATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACGGTTGGTATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAACGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACAAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTCCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCACTTGGTTTAAAAG
ACAAATCATTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1