Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | OHN35_RS05995 | Genome accession | NZ_CP107748 |
| Coordinates | 1221067..1223613 (+) | Length | 848 a.a. |
| NCBI ID | WP_326818452.1 | Uniprot ID | - |
| Organism | Streptomyces sp. NBC_00623 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1216067..1228613
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OHN35_RS05975 (OHN35_05990) | - | 1216455..1217399 (+) | 945 | WP_406309148.1 | NAD(P)-dependent oxidoreductase | - |
| OHN35_RS05980 (OHN35_05995) | - | 1217532..1218692 (-) | 1161 | WP_406309149.1 | PP2C family protein-serine/threonine phosphatase | - |
| OHN35_RS05985 (OHN35_06000) | - | 1219332..1219670 (+) | 339 | WP_326607387.1 | MerR family transcriptional regulator | - |
| OHN35_RS05990 (OHN35_06005) | - | 1220095..1220724 (-) | 630 | WP_406309150.1 | alpha-ketoglutarate-dependent dioxygenase AlkB | - |
| OHN35_RS05995 (OHN35_06010) | clpC | 1221067..1223613 (+) | 2547 | WP_326818452.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| OHN35_RS06000 (OHN35_06015) | - | 1223817..1225280 (-) | 1464 | WP_327239239.1 | multicopper oxidase family protein | - |
| OHN35_RS06005 (OHN35_06020) | - | 1225661..1226986 (+) | 1326 | WP_326624960.1 | geranylgeranyl reductase family protein | - |
| OHN35_RS06010 (OHN35_06025) | - | 1227298..1228554 (-) | 1257 | WP_327239240.1 | choice-of-anchor A family protein | - |
Sequence
Protein
Download Length: 848 a.a. Molecular weight: 93175.40 Da Isoelectric Point: 5.1582
>NTDB_id=645374 OHN35_RS05995 WP_326818452.1 1221067..1223613(+) (clpC) [Streptomyces sp. NBC_00623]
MTDGQKGPEDHGPDPLGDFLSHFLGSGQGGEPPDPRRIDFSRLLSGPARQLVTVAASYAAQHGSTDLDTEHLLRAALSTE
PTRRMVSRAGADPDALAAEIDRQAGEGPPRHFIAVTPAVKRALLDAHEIARSTGASYIGPEHVLVALAANRDSAAGQMLN
AAHFSPPTGARDGLAPAPGSAGQRHGPAERNTPNLDKFGRDLTDLAREGRIDPVIGRDAEIEQTIEVLARRSKNNPVMIG
EAGVGKTAIVEGLAQRIADSDVPDILLGRRVVQLDLSGVVAGTRFRGDFEERLTGLIDEIRAHSGELIIFIDELHTVVGA
GGGSEGGPMDASNMLKPALARGELHVVGASTLEEYRRYIEKDAALARRFQPVLIPEPSPADAVEILRGLQDRYEAHHQVR
YTDEALFAAVELSDRYLTDRYLPDKAIDLMDQAGARVRLRSSTRGTNVRTLEREVEQLTRDKDQAVAAEQYERASELRDR
LTDLEQRIAEGNDVQQPRSHVAEVTVEDIADIVSRQTGIPVSSLTQEERDRLLGLEEHLHKRVIGQDEAVTAVSDAVMRS
RAGLADPSRPIGSFLFLGPTGVGKTELARALAEALFGSEDRMIRLDMSEYQERHTVSRLVGAPPGYVGFEEAGQFTEAVR
RNPYSLLLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTIDFKNTVIVMTSNLGSQAITGRGGAMGFGAGDTDADEQARR
ERVLRPLREHFRPEFLNRIDEIVIFRQLADQQLRQITNMLLDDSRRRLRAQDVSVDVTLAAVEWLAQRGYQPEYGARPLR
RTIQREVDNRLSRMLLDGSLQPHSRLRIDVADGELTIHKEEESEHHAS
MTDGQKGPEDHGPDPLGDFLSHFLGSGQGGEPPDPRRIDFSRLLSGPARQLVTVAASYAAQHGSTDLDTEHLLRAALSTE
PTRRMVSRAGADPDALAAEIDRQAGEGPPRHFIAVTPAVKRALLDAHEIARSTGASYIGPEHVLVALAANRDSAAGQMLN
AAHFSPPTGARDGLAPAPGSAGQRHGPAERNTPNLDKFGRDLTDLAREGRIDPVIGRDAEIEQTIEVLARRSKNNPVMIG
EAGVGKTAIVEGLAQRIADSDVPDILLGRRVVQLDLSGVVAGTRFRGDFEERLTGLIDEIRAHSGELIIFIDELHTVVGA
GGGSEGGPMDASNMLKPALARGELHVVGASTLEEYRRYIEKDAALARRFQPVLIPEPSPADAVEILRGLQDRYEAHHQVR
YTDEALFAAVELSDRYLTDRYLPDKAIDLMDQAGARVRLRSSTRGTNVRTLEREVEQLTRDKDQAVAAEQYERASELRDR
LTDLEQRIAEGNDVQQPRSHVAEVTVEDIADIVSRQTGIPVSSLTQEERDRLLGLEEHLHKRVIGQDEAVTAVSDAVMRS
RAGLADPSRPIGSFLFLGPTGVGKTELARALAEALFGSEDRMIRLDMSEYQERHTVSRLVGAPPGYVGFEEAGQFTEAVR
RNPYSLLLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTIDFKNTVIVMTSNLGSQAITGRGGAMGFGAGDTDADEQARR
ERVLRPLREHFRPEFLNRIDEIVIFRQLADQQLRQITNMLLDDSRRRLRAQDVSVDVTLAAVEWLAQRGYQPEYGARPLR
RTIQREVDNRLSRMLLDGSLQPHSRLRIDVADGELTIHKEEESEHHAS
Nucleotide
Download Length: 2547 bp
>NTDB_id=645374 OHN35_RS05995 WP_326818452.1 1221067..1223613(+) (clpC) [Streptomyces sp. NBC_00623]
ATGACCGACGGACAGAAGGGTCCCGAGGACCACGGTCCGGACCCCCTCGGAGACTTCCTCTCGCACTTTCTCGGCAGCGG
ACAGGGTGGCGAGCCGCCCGACCCGCGGCGCATCGACTTCAGCCGACTGTTGAGCGGCCCCGCACGGCAGCTCGTCACCG
TCGCCGCGTCCTATGCCGCCCAGCACGGAAGCACCGACCTCGACACGGAGCATCTCTTGCGGGCCGCGCTCTCCACCGAG
CCGACACGCCGCATGGTCTCGCGAGCGGGCGCCGATCCCGATGCGCTGGCCGCCGAGATCGACCGGCAGGCCGGGGAAGG
GCCGCCACGCCACTTCATCGCCGTCACGCCGGCGGTCAAGCGCGCTCTCCTCGACGCCCATGAGATCGCGCGCTCCACCG
GCGCCTCCTATATCGGCCCGGAACACGTGCTGGTGGCACTCGCCGCCAACCGCGACTCCGCAGCGGGCCAGATGCTCAAC
GCGGCGCACTTCTCGCCACCCACCGGTGCCCGGGACGGCCTCGCACCCGCGCCCGGCAGCGCCGGCCAGCGTCACGGCCC
GGCCGAGCGGAACACCCCCAACCTGGACAAGTTCGGCCGTGACCTCACCGACCTGGCCCGGGAGGGCCGTATCGACCCGG
TCATCGGCCGTGACGCGGAGATCGAGCAGACCATCGAGGTCCTCGCCCGCCGGAGCAAGAACAATCCCGTCATGATCGGC
GAGGCCGGAGTGGGCAAGACCGCCATCGTCGAGGGACTGGCCCAGCGCATCGCGGACAGCGACGTGCCGGACATCCTGCT
GGGCCGGCGAGTCGTCCAGCTGGACCTCTCAGGAGTCGTTGCCGGTACCCGCTTCCGTGGGGACTTCGAGGAACGGCTCA
CCGGCCTCATCGACGAAATCCGCGCCCACTCGGGCGAGCTGATCATCTTCATCGACGAACTGCACACCGTCGTCGGGGCG
GGCGGCGGCTCCGAGGGTGGCCCGATGGACGCGAGCAACATGCTCAAGCCTGCCCTGGCCCGCGGCGAACTCCATGTCGT
GGGGGCCAGCACGCTCGAGGAGTACCGCCGCTACATCGAGAAGGACGCCGCGCTCGCCCGCCGGTTCCAGCCGGTTCTGA
TCCCCGAACCCAGCCCGGCGGACGCCGTCGAGATCCTGCGGGGCCTCCAGGACCGCTACGAAGCCCATCACCAGGTCCGC
TATACCGACGAGGCACTGTTCGCCGCCGTCGAGCTGTCCGACCGCTACCTCACCGACCGCTACCTGCCCGACAAGGCGAT
CGACCTGATGGACCAGGCCGGCGCACGGGTCCGACTACGCTCCTCCACCCGCGGCACCAACGTCCGCACCCTGGAACGCG
AAGTGGAGCAACTCACCCGGGACAAGGACCAGGCCGTCGCCGCCGAGCAGTACGAGCGGGCGTCCGAGCTGCGCGACCGA
CTCACCGACCTCGAGCAGCGGATCGCCGAGGGAAACGACGTACAGCAGCCCCGCAGCCATGTCGCCGAGGTCACCGTCGA
AGACATAGCCGACATCGTGTCCCGTCAGACCGGAATTCCCGTCAGCAGCCTCACTCAGGAGGAGCGGGACCGGCTGCTGG
GCTTGGAGGAACATCTGCACAAGCGCGTCATCGGCCAGGACGAAGCGGTGACCGCCGTCTCCGACGCCGTCATGCGGTCG
CGGGCCGGTCTGGCCGACCCCAGCCGCCCGATCGGGAGCTTCCTCTTCCTCGGCCCCACCGGCGTCGGCAAGACCGAACT
CGCCCGCGCGCTCGCGGAGGCGCTCTTCGGGAGCGAGGACCGGATGATCCGTCTCGACATGAGCGAGTACCAGGAACGGC
ACACCGTCAGCCGCCTGGTCGGTGCTCCCCCCGGCTACGTCGGCTTCGAGGAAGCCGGACAGTTCACCGAAGCGGTGCGA
AGGAACCCCTACTCGCTGCTGCTCCTGGACGAGATCGAGAAGGCGCACCCCGACGTCTTCAACATCCTGCTGCAGGTACT
CGACGACGGACGGCTCACCGACTCCCAGGGCCGCACGATCGATTTCAAGAACACCGTCATCGTCATGACCAGCAACCTCG
GTTCGCAGGCCATCACCGGTCGCGGCGGCGCGATGGGCTTCGGCGCCGGCGATACGGACGCCGACGAGCAGGCCCGCCGC
GAGCGGGTGCTGCGCCCCCTGCGCGAACACTTCCGGCCGGAGTTCCTCAACCGCATCGACGAGATCGTGATCTTCCGCCA
ACTCGCCGACCAGCAGCTACGGCAGATCACCAACATGCTGCTGGACGACTCCAGACGGCGGCTCCGCGCCCAGGACGTCT
CCGTCGACGTCACCCTGGCTGCTGTCGAATGGCTCGCCCAACGCGGCTACCAGCCCGAATACGGCGCCCGCCCGTTGCGC
CGTACGATCCAGCGCGAGGTGGACAACCGGCTCTCCCGCATGCTGCTCGACGGCAGCCTGCAGCCCCACAGCCGCCTCCG
GATCGACGTCGCCGACGGCGAGCTGACCATCCACAAAGAGGAAGAGTCGGAGCACCACGCGAGCTGA
ATGACCGACGGACAGAAGGGTCCCGAGGACCACGGTCCGGACCCCCTCGGAGACTTCCTCTCGCACTTTCTCGGCAGCGG
ACAGGGTGGCGAGCCGCCCGACCCGCGGCGCATCGACTTCAGCCGACTGTTGAGCGGCCCCGCACGGCAGCTCGTCACCG
TCGCCGCGTCCTATGCCGCCCAGCACGGAAGCACCGACCTCGACACGGAGCATCTCTTGCGGGCCGCGCTCTCCACCGAG
CCGACACGCCGCATGGTCTCGCGAGCGGGCGCCGATCCCGATGCGCTGGCCGCCGAGATCGACCGGCAGGCCGGGGAAGG
GCCGCCACGCCACTTCATCGCCGTCACGCCGGCGGTCAAGCGCGCTCTCCTCGACGCCCATGAGATCGCGCGCTCCACCG
GCGCCTCCTATATCGGCCCGGAACACGTGCTGGTGGCACTCGCCGCCAACCGCGACTCCGCAGCGGGCCAGATGCTCAAC
GCGGCGCACTTCTCGCCACCCACCGGTGCCCGGGACGGCCTCGCACCCGCGCCCGGCAGCGCCGGCCAGCGTCACGGCCC
GGCCGAGCGGAACACCCCCAACCTGGACAAGTTCGGCCGTGACCTCACCGACCTGGCCCGGGAGGGCCGTATCGACCCGG
TCATCGGCCGTGACGCGGAGATCGAGCAGACCATCGAGGTCCTCGCCCGCCGGAGCAAGAACAATCCCGTCATGATCGGC
GAGGCCGGAGTGGGCAAGACCGCCATCGTCGAGGGACTGGCCCAGCGCATCGCGGACAGCGACGTGCCGGACATCCTGCT
GGGCCGGCGAGTCGTCCAGCTGGACCTCTCAGGAGTCGTTGCCGGTACCCGCTTCCGTGGGGACTTCGAGGAACGGCTCA
CCGGCCTCATCGACGAAATCCGCGCCCACTCGGGCGAGCTGATCATCTTCATCGACGAACTGCACACCGTCGTCGGGGCG
GGCGGCGGCTCCGAGGGTGGCCCGATGGACGCGAGCAACATGCTCAAGCCTGCCCTGGCCCGCGGCGAACTCCATGTCGT
GGGGGCCAGCACGCTCGAGGAGTACCGCCGCTACATCGAGAAGGACGCCGCGCTCGCCCGCCGGTTCCAGCCGGTTCTGA
TCCCCGAACCCAGCCCGGCGGACGCCGTCGAGATCCTGCGGGGCCTCCAGGACCGCTACGAAGCCCATCACCAGGTCCGC
TATACCGACGAGGCACTGTTCGCCGCCGTCGAGCTGTCCGACCGCTACCTCACCGACCGCTACCTGCCCGACAAGGCGAT
CGACCTGATGGACCAGGCCGGCGCACGGGTCCGACTACGCTCCTCCACCCGCGGCACCAACGTCCGCACCCTGGAACGCG
AAGTGGAGCAACTCACCCGGGACAAGGACCAGGCCGTCGCCGCCGAGCAGTACGAGCGGGCGTCCGAGCTGCGCGACCGA
CTCACCGACCTCGAGCAGCGGATCGCCGAGGGAAACGACGTACAGCAGCCCCGCAGCCATGTCGCCGAGGTCACCGTCGA
AGACATAGCCGACATCGTGTCCCGTCAGACCGGAATTCCCGTCAGCAGCCTCACTCAGGAGGAGCGGGACCGGCTGCTGG
GCTTGGAGGAACATCTGCACAAGCGCGTCATCGGCCAGGACGAAGCGGTGACCGCCGTCTCCGACGCCGTCATGCGGTCG
CGGGCCGGTCTGGCCGACCCCAGCCGCCCGATCGGGAGCTTCCTCTTCCTCGGCCCCACCGGCGTCGGCAAGACCGAACT
CGCCCGCGCGCTCGCGGAGGCGCTCTTCGGGAGCGAGGACCGGATGATCCGTCTCGACATGAGCGAGTACCAGGAACGGC
ACACCGTCAGCCGCCTGGTCGGTGCTCCCCCCGGCTACGTCGGCTTCGAGGAAGCCGGACAGTTCACCGAAGCGGTGCGA
AGGAACCCCTACTCGCTGCTGCTCCTGGACGAGATCGAGAAGGCGCACCCCGACGTCTTCAACATCCTGCTGCAGGTACT
CGACGACGGACGGCTCACCGACTCCCAGGGCCGCACGATCGATTTCAAGAACACCGTCATCGTCATGACCAGCAACCTCG
GTTCGCAGGCCATCACCGGTCGCGGCGGCGCGATGGGCTTCGGCGCCGGCGATACGGACGCCGACGAGCAGGCCCGCCGC
GAGCGGGTGCTGCGCCCCCTGCGCGAACACTTCCGGCCGGAGTTCCTCAACCGCATCGACGAGATCGTGATCTTCCGCCA
ACTCGCCGACCAGCAGCTACGGCAGATCACCAACATGCTGCTGGACGACTCCAGACGGCGGCTCCGCGCCCAGGACGTCT
CCGTCGACGTCACCCTGGCTGCTGTCGAATGGCTCGCCCAACGCGGCTACCAGCCCGAATACGGCGCCCGCCCGTTGCGC
CGTACGATCCAGCGCGAGGTGGACAACCGGCTCTCCCGCATGCTGCTCGACGGCAGCCTGCAGCCCCACAGCCGCCTCCG
GATCGACGTCGCCGACGGCGAGCTGACCATCCACAAAGAGGAAGAGTCGGAGCACCACGCGAGCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
50.438 |
94.222 |
0.475 |
| clpC | Streptococcus pneumoniae TIGR4 |
43.623 |
98.939 |
0.432 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
45.409 |
95.047 |
0.432 |
| clpC | Streptococcus pneumoniae D39 |
43.317 |
98.821 |
0.428 |
| clpC | Streptococcus pneumoniae Rx1 |
43.317 |
98.821 |
0.428 |
| clpC | Streptococcus mutans UA159 |
42.788 |
97.288 |
0.416 |
| clpC | Streptococcus thermophilus LMD-9 |
46.499 |
89.269 |
0.415 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.103 |
89.269 |
0.412 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.71 |
81.368 |
0.404 |
| clpE | Streptococcus mutans UA159 |
51.603 |
77.241 |
0.399 |
| clpE | Streptococcus pneumoniae TIGR4 |
51.36 |
73.703 |
0.379 |
| clpE | Streptococcus pneumoniae Rx1 |
51.36 |
73.703 |
0.379 |
| clpE | Streptococcus pneumoniae D39 |
51.36 |
73.703 |
0.379 |
| clpE | Streptococcus pneumoniae R6 |
51.36 |
73.703 |
0.379 |