Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   L0999_RS11250 Genome accession   NZ_CP090870
Coordinates   2206668..2207654 (+) Length   328 a.a.
NCBI ID   WP_000959282.1    Uniprot ID   A0A7U7EXT8
Organism   Staphylococcus aureus strain SAUR_BFS62     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 2201668..2212654
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L0999_RS11225 (L0999_11225) opp4B 2201882..2202844 (+) 963 WP_103153606.1 oligopeptide ABC transporter permease -
  L0999_RS11230 (L0999_11230) opp4C 2202856..2203737 (+) 882 WP_001180280.1 oligopeptide ABC transporter permease -
  L0999_RS11235 (L0999_11235) trpS 2203779..2204768 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  L0999_RS11240 (L0999_11240) spxA 2205062..2205457 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  L0999_RS11245 (L0999_11245) mecA 2205828..2206547 (+) 720 WP_001217728.1 adaptor protein MecA -
  L0999_RS11250 (L0999_11250) coiA 2206668..2207654 (+) 987 WP_000959282.1 competence protein CoiA Machinery gene
  L0999_RS11255 (L0999_11255) pepF 2207702..2209510 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  L0999_RS11265 (L0999_11265) - 2210042..2211361 (-) 1320 WP_001557163.1 ISL3-like element IS1181 family transposase -
  L0999_RS11270 (L0999_11270) yjbH 2211490..2212296 (-) 807 WP_000896697.1 protease adaptor protein YjbH -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38878.55 Da        Isoelectric Point: 9.5714

>NTDB_id=645322 L0999_RS11250 WP_000959282.1 2206668..2207654(+) (coiA) [Staphylococcus aureus strain SAUR_BFS62]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFHSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVYNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=645322 L0999_RS11250 WP_000959282.1 2206668..2207654(+) (coiA) [Staphylococcus aureus strain SAUR_BFS62]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCTGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCATAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGTACAATTATGGTTATATTTTTCCAGAACAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7EXT8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

100

100

1
  coiA Staphylococcus aureus MW2

97.561

100

0.976