Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SMSK321_RS09635 Genome accession   NZ_AEDT01000032
Coordinates   18400..19659 (-) Length   419 a.a.
NCBI ID   WP_000900655.1    Uniprot ID   -
Organism   Streptococcus mitis SK321     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 13400..24659
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMSK321_RS09625 (SMSK321_1420) bglA 15056..16435 (-) 1380 WP_000943531.1 6-phospho-beta-glucosidase -
  SMSK321_RS09630 (SMSK321_1421) - 16534..18387 (-) 1854 WP_000814052.1 proline--tRNA ligase -
  SMSK321_RS09635 (SMSK321_1422) eeP 18400..19659 (-) 1260 WP_000900655.1 RIP metalloprotease RseP Regulator
  SMSK321_RS09640 (SMSK321_1423) - 19681..20484 (-) 804 WP_000189853.1 phosphatidate cytidylyltransferase -
  SMSK321_RS0102690 (SMSK321_1424) - 20493..21251 (-) 759 WP_000466719.1 isoprenyl transferase -
  SMSK321_RS0102700 - 21598..22170 (-) 573 WP_025171183.1 nucleotidyltransferase family protein -
  SMSK321_RS09650 (SMSK321_1426) ruvB 22151..23149 (-) 999 WP_025171184.1 Holliday junction branch migration DNA helicase RuvB -
  SMSK321_RS0102705 - 23282..23374 (+) 93 WP_000970294.1 type I toxin-antitoxin system Fst family toxin -
  SMSK321_RS09655 (SMSK321_1427) - 23952..24371 (-) 420 WP_000628408.1 GNAT family N-acetyltransferase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45890.54 Da        Isoelectric Point: 5.7186

>NTDB_id=64516 SMSK321_RS09635 WP_000900655.1 18400..19659(-) (eeP) [Streptococcus mitis SK321]
MLGILTFILVFGIIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRILPLGGYVRMAGWGDDTTEIKT
GTPVSLTLADDGKVKRINLSGKKLDQTALPMQVTQFDFEDKLFIKGLVLEEEKTFAVDHDATVVEADGTEVRIAPLDVQY
QNATIWGKLITNFAGPMNNFILGVVVFWILIFMQGGVRDVDTNQFHIMPQGALAKVGVPETAQITKIGSHEVSNWESLIQ
AVESETKDKTAPTLDVTISEKGSDKQVTVTPEESQGRYLLGVQPGIKSDFVSMFVGGFTTAADSALRILSELKNLIFQPD
LNKLGGPVAIFKASSDAAKNGIENVLYFLAVISINIGIFNLIPIPALDGGKIVLNILEAIRRKPLKQEIETYVTLAGVVI
MVVLMIAVTWNDIMRLFFR

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=64516 SMSK321_RS09635 WP_000900655.1 18400..19659(-) (eeP) [Streptococcus mitis SK321]
ATGCTCGGAATTTTAACCTTTATTCTGGTTTTTGGGATTATTGTAGTGGTGCACGAGTTCGGACACTTCTACTTTGCCAA
GAAATCAGGGATTCTAGTGCGTGAATTTGCCATTGGCATGGGACCCAAGATCTTTGCTCATATTGGCAAGGATGGGACGG
CCTATACCATTCGAATCTTGCCTCTGGGTGGCTATGTTCGCATGGCCGGTTGGGGTGATGATACAACTGAAATCAAGACA
GGAACTCCTGTCAGTTTGACGCTTGCTGATGATGGTAAGGTTAAGCGCATCAATCTTTCAGGTAAAAAATTGGATCAAAC
AGCTCTTCCTATGCAGGTGACCCAGTTTGATTTTGAAGACAAGCTCTTTATCAAGGGCTTGGTTCTGGAAGAAGAAAAAA
CATTTGCAGTGGATCACGATGCAACGGTTGTGGAAGCAGATGGTACTGAGGTTCGGATTGCACCTTTAGATGTTCAATAT
CAAAATGCGACTATCTGGGGGAAACTGATTACTAATTTTGCAGGCCCTATGAACAACTTTATCTTAGGGGTTGTTGTTTT
CTGGATTTTAATCTTCATGCAGGGTGGTGTCAGAGATGTCGATACCAACCAGTTCCATATTATGCCTCAAGGGGCTTTGG
CTAAGGTAGGAGTACCAGAAACGGCACAAATTACCAAGATTGGCTCACATGAGGTTAGCAACTGGGAAAGTTTGATTCAG
GCTGTGGAATCAGAAACCAAAGATAAGACGGCCCCGACCTTGGATGTGACTATTTCTGAAAAGGGGAGTGACAAACAAGT
CACTGTTACTCCGGAAGAAAGTCAAGGCCGTTACCTTCTAGGTGTTCAACCGGGGATTAAGTCAGATTTTGTATCTATGT
TTGTAGGTGGTTTTACAACTGCTGCTGACTCGGCCCTCCGAATTCTCTCAGAACTGAAAAATCTGATTTTCCAACCGGAT
TTGAACAAGCTAGGTGGACCTGTTGCCATCTTTAAGGCAAGTAGTGATGCTGCTAAAAATGGAATTGAGAATGTCTTGTA
CTTCTTGGCAGTGATTTCCATCAATATCGGGATTTTTAACCTTATTCCGATTCCAGCTCTGGATGGTGGTAAGATTGTGC
TCAATATTCTGGAAGCTATTCGCCGTAAACCATTGAAACAAGAAATTGAAACCTATGTCACCTTGGCCGGAGTGGTCATC
ATGGTTGTCTTGATGATTGCTGTGACCTGGAATGACATTATGCGACTCTTTTTTAGATAA

Domains


Predicted by InterproScan.

(6-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

63.81

100

0.64

  eeP Streptococcus thermophilus LMG 18311

63.571

100

0.637


Multiple sequence alignment