Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   NEISUBOT_RS07145 Genome accession   NZ_ACEO02000007
Coordinates   119857..120552 (+) Length   231 a.a.
NCBI ID   WP_004520275.1    Uniprot ID   A0A9W5IQR1
Organism   Neisseria subflava NJ9703     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 114857..125552
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NEISUBOT_RS07125 (NEISUBOT_04692) - 115761..116540 (+) 780 WP_004520268.1 exodeoxyribonuclease III -
  NEISUBOT_RS07130 (NEISUBOT_04693) - 116527..116871 (+) 345 WP_004520269.1 hypothetical protein -
  NEISUBOT_RS07135 (NEISUBOT_04694) - 116882..117415 (+) 534 WP_004520270.1 alpha/beta hydrolase -
  NEISUBOT_RS07140 - 117575..119686 (+) 2112 WP_039862296.1 TonB-dependent receptor -
  NEISUBOT_RS07145 (NEISUBOT_04699) dsbA2 119857..120552 (+) 696 WP_004520275.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NEISUBOT_RS07150 (NEISUBOT_04700) - 120691..120990 (+) 300 WP_004520276.1 hypothetical protein -
  NEISUBOT_RS07155 (NEISUBOT_04701) ffh 121094..122464 (-) 1371 WP_004520277.1 signal recognition particle protein -
  NEISUBOT_RS07160 (NEISUBOT_04703) ccsA 122644..123456 (+) 813 WP_003749434.1 cytochrome C assembly family protein -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25375.89 Da        Isoelectric Point: 5.3625

>NTDB_id=64475 NEISUBOT_RS07145 WP_004520275.1 119857..120552(+) (dsbA2) [Neisseria subflava NJ9703]
MKLKTLALTSLTLLALAACGKQAETSVPADSAQSSTSAPAAPAALTEGVNYTVLSNPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLATFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=64475 NEISUBOT_RS07145 WP_004520275.1 119857..120552(+) (dsbA2) [Neisseria subflava NJ9703]
ATGAAACTGAAAACCTTAGCCTTGACTTCATTAACCCTGTTGGCATTGGCCGCTTGCGGCAAACAGGCGGAAACCAGTGT
TCCGGCAGACAGCGCCCAAAGCAGCACATCCGCTCCGGCAGCCCCTGCCGCATTGACAGAAGGTGTCAATTACACCGTCT
TGTCCAACCCGATTCCGCAACAGCAGGCCGGCAAAATCGAAGTATTGGAATTCTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAACACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTCTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAACCAAAAAATCAACTTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACCGCATTT
GACGGCAAAAAAGTATTGGCTACATTTGAAGCGCCCGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAATTGACCAATAA
ATTCCAAATCAGCGGCACACCGACCGTGATCGTCGGCGGCAAATACCAAGTCGAATTTAAAGACTGGCAGTCCGGCATGA
CCACGATTGACCAACTGGTGGACAAAGTACGCGAAGAGCAGAAAAAACCGCAATAA

Domains


Predicted by InterproScan.

(65-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

97.403

100

0.974

  dsbA1 Neisseria meningitidis MC58

71.245

100

0.719


Multiple sequence alignment