Detailed information NTG0642441

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OE961_RS05190
• Genome accession: NZ_CP107223
• Coordinates: 977094..978338 (-)
• Length: 414 a.a.
• NCBI ID: WP_003691289.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain H035
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 972094..983338

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OE961_RS05160 (OE961_05160)	-	972297..973685 (+)	1389	WP_003688859.1	DEAD/DEAH box helicase	-
OE961_RS05170 (OE961_05170)	-	974036..974236 (-)	201	WP_003688861.1	hypothetical protein	-
OE961_RS05175 (OE961_05175)	-	974250..974804 (-)	555	WP_003688863.1	hypothetical protein	-
OE961_RS05180 (OE961_05180)	-	974889..975389 (-)	501	WP_010357954.1	hypothetical protein	-
OE961_RS05185 (OE961_05185)	-	975794..976987 (+)	1194	WP_003691287.1	aspartate aminotransferase family protein	-
OE961_RS05190 (OE961_05190)	clpX	977094..978338 (-)	1245	WP_003691289.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OE961_RS05195 (OE961_05195)	rbfA	978521..978892 (+)	372	WP_003688871.1	30S ribosome-binding factor RbfA	-
OE961_RS05200 (OE961_05200)	-	978903..979427 (+)	525	WP_003688872.1	hypothetical protein	-
OE961_RS05205 (OE961_05205)	truB	979485..980405 (+)	921	WP_003688873.1	tRNA pseudouridine(55) synthase TruB	-
OE961_RS05210 (OE961_05210)	-	980622..982832 (+)	2211	WP_106274953.1	DNA methyltransferase	-

Sequence

Protein

• Length: 414 a.a.
• Molecular weight: 44817.21 Da
• Isoelectric Point: 4.8622

>NTDB_id=642441 OE961_RS05190 WP_003691289.1 977094..978338(-) (clpX) [Neisseria gonorrhoeae strain H035]
MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVANCLEILYEGDNGGTPPENAGGEPEESGKLPTPAEIVANLDDYVIG
QGQAKKALAVAVYNHYKRLRHPKADGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
IITKLLGKCDFDVEKAQHGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDT
ANILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSKDENAGITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDA
LINILTEPKNALVKQYQALFGIENVGLEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRLPDLQGLKKVVVGKA
VIEEGREPELVFES

Nucleotide

• Length: 1245 bp

>NTDB_id=642441 OE961_RS05190 WP_003691289.1 977094..978338(-) (clpX) [Neisseria gonorrhoeae strain H035]
ATGTCCAACGAAAACCGTACCTGTTCCTTTTGCGGAAAATCCAAATCACACGTCAAACATTTGATTGAGGGCGAAAACGC
CTTTATCTGCGACGAATGCGTCGCAAACTGCCTCGAAATATTGTACGAAGGCGACAACGGCGGCACGCCTCCGGAAAATG
CCGGAGGGGAGCCGGAAGAATCCGGCAAACTGCCCACGCCCGCCGAAATCGTTGCCAACCTCGACGATTATGTCATCGGG
CAGGGGCAGGCGAAAAAGGCGCTGGCGGTTGCGGTTTACAACCATTACAAACGCCTGCGCCACCCGAAAGCCGACGGCGG
TGTCGAATTGTCGAAATCCAACATCCTGCTTATCGGCCCGACCGGATCGGGTAAAACGCTGTTGGCGCAATCTTTGGCAC
GCAAACTGGACGTGCCGTTCGTGATGGCGGATGCGACCACGCTGACCGAAGCCGGCTATGTCGGCGAAGATGTCGAACAA
ATCATTACCAAACTGTTGGGCAAATGCGATTTCGATGTCGAAAAAGCCCAGCACGGCATTGTCTATATTGACGAAATTGA
CAAAATTTCGCGTAAAAGCGACAACCCGTCCATCACGCGCGACGTGTCCGGCGAAGGCGTGCAGCAAGCCTTGCTGAAAC
TGATTGAAGGTACGGTGGCAAGCGTTCCGCCCCAAGGCGGACGCAAGCATCCGAATCAGGAATTTATCAACGTTGATACC
GCCAACATCCTGTTTATCTGCGGCGGCGCGTTTGCAGGCTTGGAAAAAGTGATTCGCCAGCGCACCGAGAAAGGTGGTAT
CGGTTTCGGCGCGTCCGTTCACAGCAAGGACGAAAATGCCGGCATTACCAAGCTGTTCGGCATCGTCGAACCGGAAGATT
TAATCAAATTCGGCCTGATTCCGGAATTAATCGGACGTTTGCCCGTGATTGCAACTTTAGAAGAACTGGATGAGGACGCG
CTGATTAATATTTTAACCGAGCCGAAAAACGCTTTGGTCAAGCAGTATCAAGCCTTGTTCGGCATAGAAAACGTCGGGTT
GGAATTTGAAGAAGGCGCATTGCGTTCCATCGCGCGGCAGGCAATGGAACGCAAAACCGGCGCGCGCGGCCTGCGTTCCA
TCGTCGAACGCTGCCTGCTCGATACGATGTACCGCCTGCCCGATTTGCAAGGCTTGAAAAAAGTGGTGGTCGGCAAGGCA
GTCATCGAAGAGGGCAGGGAACCGGAATTGGTGTTCGAGTCCTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (112-310)

• ClpX C4-type zinc finger (zf-C4_ClpX) (7-42)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (316-387)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	56.28	100	0.563
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.448	99.758	0.553