Detailed information NTG0641730

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: LW136_RS14950
• Genome accession: NZ_CP090366
• Coordinates: 3173162..3175387 (-)
• Length: 741 a.a.
• NCBI ID: WP_031298329.1
• Uniprot ID: -
• Organism: Stutzerimonas kunmingensis strain 7850S
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3168162..3180387

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LW136_RS14915 (LW136_14915)	murB	3168555..3169574 (-)	1020	WP_041014485.1	UDP-N-acetylmuramate dehydrogenase	-
LW136_RS14920 (LW136_14920)	-	3169571..3170035 (-)	465	WP_023446727.1	low molecular weight protein-tyrosine-phosphatase	-
LW136_RS14925 (LW136_14925)	kdsB	3170037..3170801 (-)	765	WP_041014486.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
LW136_RS14930 (LW136_14930)	-	3170798..3170983 (-)	186	WP_003299639.1	Trm112 family protein	-
LW136_RS14935 (LW136_14935)	lpxK	3171029..3172033 (-)	1005	WP_041014487.1	tetraacyldisaccharide 4'-kinase	-
LW136_RS14940 (LW136_14940)	-	3172033..3172461 (-)	429	WP_014820907.1	ExbD/TolR family protein	-
LW136_RS14945 (LW136_14945)	-	3172458..3173090 (-)	633	WP_234173170.1	MotA/TolQ/ExbB proton channel family protein	-
LW136_RS14950 (LW136_14950)	comA	3173162..3175387 (-)	2226	WP_031298329.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LW136_RS14955 (LW136_14955)	-	3175538..3176053 (+)	516	WP_003299644.1	DUF2062 domain-containing protein	-
LW136_RS14960 (LW136_14960)	-	3176060..3177304 (-)	1245	WP_041014588.1	lipoprotein-releasing ABC transporter permease subunit	-
LW136_RS14965 (LW136_14965)	lolD	3177304..3178002 (-)	699	WP_041014488.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
LW136_RS14970 (LW136_14970)	-	3178010..3179257 (-)	1248	WP_041014489.1	lipoprotein-releasing ABC transporter permease subunit	-
LW136_RS14975 (LW136_14975)	-	3179294..3179929 (+)	636	WP_082041321.1	PilZ domain-containing protein	-
LW136_RS14980 (LW136_14980)	-	3179933..3180241 (+)	309	WP_014820912.1	hypothetical protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80914.36 Da
• Isoelectric Point: 9.8727

>NTDB_id=641730 LW136_RS14950 WP_031298329.1 3173162..3175387(-) (comA) [Stutzerimonas kunmingensis strain 7850S]
MRTWMLALAAGLVLPRFLPALPSVWILCVLGVLGGLLLSRRRWASSGLLLLGFAWACWQCQSAIDDRLPVSQDGRTYWIQ
GTVSGLPTSTGDVVRFELEDIESRHAGLPSKVRLSWYGGPQVRAGERWRLAARLKRPRGLVNPHAFDYEAWLLARRIGAT
GSVKAGERLFAPHSVNSWRDRLRLRLMEVSASGRQGAIAALVVGDDSGLSREDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALAARWGFWPSRWPWLPCACALALAGALSYGWLAGFDVPVRRACLMVAVVLLWRLRFRHLGVWQPLLLALNGVLLV
DPLVSLQPGFWLSFGAVAVLALAFSGRLGRWKWWATLTRAQWAASLGLLPLLLTLGLPVSASGPLANLIAVPWVSLTVPF
ALLGTLLLPLGAIGETLLWLVGTSLALLLELLSAMATWQPAWLAVGIPIWALLMIGLGVLLMLLPSGVPVRALGLVLLAP
LVYPPYSEVAEGRAQVSVLDVGQGLSVLVRTREHALLYDAGPRQGDFDTGERVVFPSLRSLGVKRLDILLLSHADNDHSG
GAQAIRRLLPVARTVSGEPQRHATDLNAKPCENGAEWRWNGVRFSLWQWQAARESNQTSCVLLVEANGERVLLTGDIDQA
AEQALLLSGQDVKAQWLLLPHHGSRSSSSEPFLRAVEPSAALISRSLHNAFGHPHPTVTARLEASAIDVYDTALHGAIRI
DLGDFSVAEIQRAERRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=641730 LW136_RS14950 WP_031298329.1 3173162..3175387(-) (comA) [Stutzerimonas kunmingensis strain 7850S]
ATGCGCACATGGATGTTGGCGCTCGCGGCAGGCCTCGTCTTGCCCCGTTTCTTACCGGCGTTGCCCTCTGTCTGGATCTT
GTGCGTGCTTGGCGTGCTGGGGGGCTTGCTGCTTTCGCGTCGGCGCTGGGCGTCGTCTGGGTTGCTTCTCCTCGGGTTCG
CCTGGGCATGCTGGCAGTGCCAGAGTGCCATTGATGATCGCCTGCCCGTTTCGCAAGATGGCCGGACATACTGGATCCAG
GGGACGGTCAGTGGATTGCCCACCAGCACGGGCGATGTCGTGCGCTTCGAGTTGGAGGATATCGAGTCGAGGCATGCTGG
GCTGCCATCGAAGGTGCGTCTGTCCTGGTACGGCGGCCCGCAAGTGCGGGCCGGCGAGCGTTGGCGGCTTGCGGCTCGAC
TGAAACGTCCGCGTGGCCTGGTCAATCCGCATGCGTTCGACTACGAAGCCTGGTTGCTGGCGCGTCGCATTGGCGCGACC
GGTTCGGTCAAGGCGGGAGAGCGCCTCTTCGCGCCGCACTCCGTGAATAGTTGGCGCGACCGCTTGAGGCTCCGTCTGAT
GGAGGTCTCCGCGTCCGGTCGACAAGGCGCGATCGCGGCACTGGTGGTCGGTGATGACTCCGGCCTGAGTCGTGAGGATT
GGCAGGTGTTGCAGGACACCGGCACGGTGCACCTGATGGTCATATCGGGACAGCACATCGGCATGCTGGCTGGCTTGCTA
TACGGACTGGTTGCGCTAGCAGCTCGATGGGGCTTCTGGCCCAGCCGTTGGCCCTGGCTTCCATGCGCATGCGCGTTGGC
TCTCGCTGGTGCGCTTTCCTATGGATGGCTCGCGGGGTTCGATGTGCCGGTGCGTCGTGCGTGTCTCATGGTCGCCGTGG
TCCTGCTCTGGCGCTTGCGCTTTCGTCATCTGGGTGTCTGGCAGCCGCTGTTGCTGGCGCTGAATGGTGTCCTGCTGGTC
GATCCCCTGGTCTCGTTGCAGCCGGGGTTTTGGCTCTCATTCGGGGCCGTTGCGGTGCTCGCGCTGGCGTTCTCCGGTCG
GCTCGGCCGATGGAAGTGGTGGGCGACGCTGACGCGCGCCCAATGGGCAGCTTCCCTCGGCCTGCTGCCTCTGTTACTGA
CGTTGGGACTGCCGGTCAGCGCCAGCGGGCCTTTGGCCAATCTGATTGCCGTACCCTGGGTAAGCCTCACCGTTCCCTTC
GCGCTGCTCGGTACGTTGCTTCTGCCGTTGGGCGCTATCGGCGAGACGCTACTCTGGTTGGTCGGCACCTCGCTGGCGCT
GCTGTTGGAGCTGCTGTCCGCCATGGCTACCTGGCAACCCGCCTGGCTGGCGGTCGGTATACCCATCTGGGCCTTGCTGA
TGATTGGGCTGGGTGTGCTGTTGATGTTATTGCCGTCAGGTGTGCCGGTGCGTGCGCTCGGACTGGTGCTCCTGGCGCCG
TTGGTGTATCCGCCGTATTCCGAAGTAGCCGAAGGACGGGCGCAGGTCTCGGTGCTGGATGTGGGGCAGGGGCTTTCGGT
ACTGGTGCGGACCCGGGAGCACGCGTTGCTCTACGATGCGGGACCGAGACAGGGTGATTTCGATACCGGCGAGCGTGTCG
TGTTCCCGTCGCTGCGAAGCCTGGGCGTGAAGAGGCTGGACATACTGCTGCTGAGCCATGCGGATAACGATCATTCCGGT
GGCGCTCAGGCGATCCGTCGACTGCTTCCGGTCGCGCGGACCGTCAGTGGGGAGCCGCAACGACATGCGACCGATCTGAA
TGCCAAGCCCTGTGAAAACGGTGCCGAGTGGCGGTGGAACGGCGTGCGTTTCAGTCTCTGGCAATGGCAGGCGGCCCGGG
AAAGCAATCAGACGTCATGCGTTCTGCTGGTCGAGGCCAATGGCGAACGGGTGCTGCTTACCGGCGATATCGATCAGGCC
GCGGAGCAGGCGTTGCTGCTCAGCGGACAGGATGTAAAGGCGCAGTGGTTGCTATTGCCTCATCACGGCAGCCGCAGCTC
ATCGTCGGAGCCATTCCTGCGAGCGGTGGAACCGAGCGCCGCGCTGATCTCGCGCAGCCTGCACAACGCTTTCGGTCATC
CTCATCCGACTGTGACCGCTCGCCTCGAAGCGTCCGCAATCGACGTTTACGACACCGCCTTGCACGGCGCGATCCGCATC
GATCTCGGCGATTTCTCGGTGGCGGAGATACAGCGTGCGGAACGTCGGTTTTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-683)

• Competence protein (Competence) (201-464)

• Domain of unknown function (DUF4131) (DUF4131) (22-168)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.435	96.896	0.644
comA	Ralstonia pseudosolanacearum GMI1000	36.494	100	0.379