Detailed information NTG0641583

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: LXN49_RS05560
• Genome accession: NZ_CP090354
• Coordinates: 1153489..1154451 (+)
• Length: 320 a.a.
• NCBI ID: WP_234107710.1
• Uniprot ID: -
• Organism: Bacillus safensis strain H31R-08
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1148489..1159451

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LXN49_RS05530 (LXN49_05530)	argF	1148828..1149778 (+)	951	WP_073204694.1	ornithine carbamoyltransferase	-
LXN49_RS05535 (LXN49_05535)	-	1149881..1150060 (+)	180	WP_008348517.1	YjzC family protein	-
LXN49_RS05540 (LXN49_05540)	-	1150224..1151489 (+)	1266	WP_024425058.1	MFS transporter	-
LXN49_RS05545 (LXN49_05545)	-	1151601..1151795 (-)	195	WP_003211779.1	YjzD family protein	-
LXN49_RS05550 (LXN49_05550)	-	1152008..1152748 (+)	741	WP_024425057.1	hypothetical protein	-
LXN49_RS05555 (LXN49_05555)	-	1152822..1153397 (+)	576	WP_234107709.1	nad binding enzyme	-
LXN49_RS05560 (LXN49_05560)	med	1153489..1154451 (+)	963	WP_234107710.1	BMP family ABC transporter substrate-binding protein	Regulator
LXN49_RS05565 (LXN49_05565)	comZ	1154464..1154661 (+)	198	WP_024425054.1	ComZ family protein	Regulator
LXN49_RS05570 (LXN49_05570)	-	1154672..1154905 (-)	234	WP_024426489.1	hypothetical protein	-
LXN49_RS05575 (LXN49_05575)	-	1155077..1156015 (+)	939	WP_024425052.1	beta-ketoacyl-ACP synthase III	-
LXN49_RS05580 (LXN49_05580)	fabF	1156037..1157278 (+)	1242	WP_024425051.1	beta-ketoacyl-ACP synthase II	-
LXN49_RS05585 (LXN49_05585)	-	1157356..1158159 (+)	804	WP_234107711.1	DUF2268 domain-containing protein	-
LXN49_RS05590 (LXN49_05590)	-	1158309..1159289 (+)	981	WP_025093401.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 35567.41 Da
• Isoelectric Point: 5.1094

>NTDB_id=641583 LXN49_RS05560 WP_234107710.1 1153489..1154451(+) (med) [Bacillus safensis strain H31R-08]
MKYQRLVMIFSFLLLLSACSQAPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLSIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPNIQFITVNGNKPQAGNVTNVTFKGGAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQDEYSFDFKEGVVEMGKFSSTIDDAFVKDIESDIASYKKTGKLPNEK

Nucleotide

• Length: 963 bp

>NTDB_id=641583 LXN49_RS05560 WP_234107710.1 1153489..1154451(+) (med) [Bacillus safensis strain H31R-08]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTATTATCTGCCTGCTCGCAGGCGCCTTTAAAAGGAAA
AATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATCAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
GTATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAGGAGAAAATCGTTGATGCCATTGAA
GAATTCCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGTGAAATTTTTAACTTGATCAGTGAAGA
TTATCCAAACATACAATTTATTACGGTCAATGGAAACAAGCCTCAGGCGGGCAATGTCACAAACGTGACGTTTAAAGGTG
GAGCGATGGGCTTTTTCGGAGGCATGACAGCTGCACATATGTCAAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGTGAAGTAGACGGCTTTATCAAAGGAGCAAAATATCAAGATGAACATGTACAAGTATTAGCAGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCGGTGGAGCTTTATCAAAAATTAAAAAAGCAGGGCGTTGATGTTGTGTATCCAGCAG
GTGATGGGTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGGTACGTCACCGATCAATCC
AACCTCGGCAGCCATACAGTTTTAACGAGCACTGTACAGCATGTTGATAAAGCGTACAGTATCATTGCAAAGAAGTTTAA
TGAAGGCAAGCTAAATGAACAAGATGAGTACTCCTTTGATTTTAAAGAAGGAGTGGTCGAGATGGGGAAATTTAGTTCCA
CCATTGACGACGCTTTTGTGAAAGACATTGAAAGTGATATTGCGTCATACAAAAAAACAGGTAAACTGCCAAATGAAAAG
TGA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (28-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	64.217	97.813	0.628