Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LXM48_RS10685 Genome accession   NZ_CP090180
Coordinates   2162471..2162854 (-) Length   127 a.a.
NCBI ID   WP_004694493.1    Uniprot ID   A0A7H8SES6
Organism   Acinetobacter johnsonii strain DJ-Red     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2157471..2167854
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LXM48_RS10670 (LXM48_10670) - 2159409..2161481 (-) 2073 WP_234303902.1 methyl-accepting chemotaxis protein -
  LXM48_RS10675 (LXM48_10675) - 2161532..2162068 (-) 537 WP_004694490.1 chemotaxis protein CheW -
  LXM48_RS10680 (LXM48_10680) - 2162074..2162442 (-) 369 WP_004694491.1 response regulator -
  LXM48_RS10685 (LXM48_10685) pilG 2162471..2162854 (-) 384 WP_004694493.1 twitching motility response regulator PilG Regulator
  LXM48_RS10690 (LXM48_10690) - 2163135..2163773 (+) 639 WP_010326240.1 hypothetical protein -
  LXM48_RS10695 (LXM48_10695) - 2163831..2164958 (+) 1128 WP_234303903.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14184.23 Da        Isoelectric Point: 4.8722

>NTDB_id=641021 LXM48_RS10685 WP_004694493.1 2162471..2162854(-) (pilG) [Acinetobacter johnsonii strain DJ-Red]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFDALSKIAQANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVVMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=641021 LXM48_RS10685 WP_004694493.1 2162471..2162854(-) (pilG) [Acinetobacter johnsonii strain DJ-Red]
ATGGACGATAAATTCCAGAATCTAAAAGTAATGGTCATTGATGATTCAAAAACCATTCGTCGCACAGCTGAAACACTATT
GCAACGTGAAGGTTGTGAAGTGGTGACTGCAGTCGATGGTTTTGATGCATTGTCAAAAATTGCTCAAGCCAATCCTGATA
TCGTATTTGTCGACATTATGATGCCACGACTAGATGGTTATCAAACGTGTGCATTAATCAAAAATTCACAAAATTATCAA
AATATTCCTGTCGTGATGCTCTCTAGCAAAGATGGTCTATTTGACCAAGCCAAAGGGCGTGTTGTCGGTTCAGATGAATA
TTTAACAAAGCCGTTTAGTAAAGATGAATTATTAAATGCAATTCGTAATCACGTTTCAGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8SES6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

94.488

100

0.945
  vicR Streptococcus mutans UA159

39.316

92.126

0.362