Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LW858_RS04445 Genome accession   NZ_CP090081
Coordinates   864243..864419 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus cereus strain CPT56D-587-MTF     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 859243..869419
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LW858_RS04425 (LW858_04425) clpC 859574..862174 (+) 2601 WP_233936080.1 ATP-dependent chaperone ClpB Regulator
  LW858_RS04430 (LW858_04430) - 862213..862395 (-) 183 WP_001211116.1 YjzD family protein -
  LW858_RS04435 (LW858_04435) - 862552..863286 (+) 735 WP_000028712.1 hydrolase -
  LW858_RS04440 (LW858_04440) - 863316..864188 (+) 873 WP_002164601.1 NAD(P)-dependent oxidoreductase -
  LW858_RS04445 (LW858_04445) comZ 864243..864419 (+) 177 WP_001986215.1 ComZ family protein Regulator
  LW858_RS04450 (LW858_04450) fabH 864808..865740 (+) 933 WP_001100547.1 beta-ketoacyl-ACP synthase III -
  LW858_RS04455 (LW858_04455) fabF 865772..867010 (+) 1239 WP_233936082.1 beta-ketoacyl-ACP synthase II -
  LW858_RS04460 (LW858_04460) - 867117..867905 (+) 789 WP_000513277.1 DUF2268 domain-containing putative Zn-dependent protease -
  LW858_RS04465 (LW858_04465) - 868049..868795 (+) 747 WP_000966127.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=640590 LW858_RS04445 WP_001986215.1 864243..864419(+) (comZ) [Bacillus cereus strain CPT56D-587-MTF]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=640590 LW858_RS04445 WP_001986215.1 864243..864419(+) (comZ) [Bacillus cereus strain CPT56D-587-MTF]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAGGCCTATGAGCTCGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586