Detailed information NTG0640486

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OGM54_RS15745
• Genome accession: NZ_CP107114
• Coordinates: 3117426..3118451 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain S14
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3112426..3123451

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OGM54_RS15725 (OGM54_15710)	metJ	3113611..3113928 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
OGM54_RS15730 (OGM54_15715)	yiiX	3113988..3114596 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
OGM54_RS15735 (OGM54_15720)	rpmE	3114657..3114869 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
OGM54_RS15740 (OGM54_15725)	priA	3115072..3117270 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
OGM54_RS15745 (OGM54_15730)	cytR	3117426..3118451 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
OGM54_RS15750 (OGM54_15735)	ftsN	3118543..3119502 (+)	960	WP_000068834.1	cell division protein FtsN	-
OGM54_RS15755 (OGM54_15740)	hslV	3119595..3120125 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
OGM54_RS15760 (OGM54_15745)	hslU	3120135..3121466 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
OGM54_RS15765 (OGM54_15750)	menA	3121533..3122459 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
OGM54_RS15770 (OGM54_15755)	rraA	3122552..3123037 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
OGM54_RS15775 (OGM54_15760)	zapB	3123122..3123367 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=640486 OGM54_RS15745 WP_000644908.1 3117426..3118451(+) (cytR) [Escherichia coli strain S14]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=640486 OGM54_RS15745 WP_000644908.1 3117426..3118451(+) (cytR) [Escherichia coli strain S14]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625