Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   ODQ18_RS17695 Genome accession   NZ_CP107039
Coordinates   3415870..3416244 (+) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain 11060     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3410870..3421244
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ODQ18_RS17675 (ODQ18_17675) acdA 3411409..3412548 (+) 1140 WP_108029079.1 acyl-CoA dehydrogenase AcdA -
  ODQ18_RS17680 (ODQ18_17680) rpoE 3412731..3413252 (+) 522 WP_014665742.1 DNA-directed RNA polymerase subunit delta -
  ODQ18_RS17685 (ODQ18_17685) pyrG 3413494..3415101 (+) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  ODQ18_RS17690 (ODQ18_17690) ywjG 3415183..3415704 (-) 522 WP_041850423.1 DUF2529 domain-containing protein -
  ODQ18_RS17695 (ODQ18_17695) letA 3415870..3416244 (+) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  ODQ18_RS17700 (ODQ18_17700) fbaA 3416425..3417282 (+) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  ODQ18_RS17705 (ODQ18_17705) fsa 3417402..3418040 (+) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  ODQ18_RS17710 (ODQ18_17710) murAB 3418419..3419708 (+) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  ODQ18_RS17715 (ODQ18_17715) glpX 3419739..3420704 (+) 966 WP_003242962.1 class II fructose-bisphosphatase -
  ODQ18_RS17720 (ODQ18_17720) - 3420919..3421080 (+) 162 WP_003227632.1 hypothetical protein -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=640322 ODQ18_RS17695 WP_003227621.1 3415870..3416244(+) (letA) [Bacillus subtilis strain 11060]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=640322 ODQ18_RS17695 WP_003227621.1 3415870..3416244(+) (letA) [Bacillus subtilis strain 11060]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCCCTGACGCACTTTGCAAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363