Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   ODQ18_RS06830 Genome accession   NZ_CP107039
Coordinates   1326051..1327319 (-) Length   422 a.a.
NCBI ID   WP_072174245.1    Uniprot ID   -
Organism   Bacillus subtilis strain 11060     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1321051..1332319
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ODQ18_RS06825 (ODQ18_06825) proS 1324324..1326018 (-) 1695 WP_003231918.1 proline--tRNA ligase -
  ODQ18_RS06830 (ODQ18_06830) eeP 1326051..1327319 (-) 1269 WP_072174245.1 RIP metalloprotease RseP Regulator
  ODQ18_RS06835 (ODQ18_06835) dxr 1327326..1328477 (-) 1152 WP_003245155.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  ODQ18_RS06840 (ODQ18_06840) cdsA 1328539..1329348 (-) 810 WP_072174243.1 phosphatidate cytidylyltransferase -
  ODQ18_RS06845 (ODQ18_06845) uppS 1329352..1330134 (-) 783 WP_003231925.1 isoprenyl transferase -
  ODQ18_RS06850 (ODQ18_06850) frr 1330265..1330822 (-) 558 WP_003231927.1 ribosome recycling factor -
  ODQ18_RS06855 (ODQ18_06855) pyrH 1330824..1331546 (-) 723 WP_003220923.1 UMP kinase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46680.43 Da        Isoelectric Point: 5.0764

>NTDB_id=640243 ODQ18_RS06830 WP_072174245.1 1326051..1327319(-) (eeP) [Bacillus subtilis strain 11060]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKEDQVEKVIINQKEKYPDALVIEVETADLEHDMKITGYEQGKEDELSSFTVSETSFFIVDGEEVQIAPYN
RQFGSKPVWQRIKAIAAGPIMNFILAYVILVMLGLIQGVPSNEPMLGQLTDNGRAAEAGLKEGDYIQSINGEKMRSWTDI
VSAVKENPEKEMDVAVKRANKTLHISVTPEAVKDENKKTIGRFGSYAPTEKGVLSAVAYGATSTVDIGNQILETFGNLVT
GQFKINMLAGPVGIYDMTDQVAKTGLVNLVRFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINREKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=640243 ODQ18_RS06830 WP_072174245.1 1326051..1327319(-) (eeP) [Bacillus subtilis strain 11060]
ATGTTCGTGAATACAGTTATAGCGTTTATCATTATTTTCGGAACGCTCGTTTTCTTCCATGAACTGGGCCATTTATTGCT
AGCCCAAAGAGCGGGAATTCTCTGCCGTGAATTTGCGATCGGCTTCGGTCCAAAGATTTTTTCTTTCAAAAAAAATGAAA
CAGTTTATACGATCAGGCTGCTTCCGGTCGGCGGATTTGTTCGTATGGCCGGCGAAGATCCGGAAATGATTGAGGTGAAA
CCCGGATACACGGTCGGGCTTCTGTTTAATAAGGAAGATCAAGTTGAGAAAGTCATCATCAATCAAAAGGAAAAATATCC
GGATGCTTTAGTCATTGAAGTGGAAACAGCGGATCTAGAGCATGACATGAAGATCACCGGTTATGAACAGGGGAAAGAGG
ACGAACTTTCCAGCTTTACTGTCAGCGAAACATCCTTTTTTATTGTAGACGGAGAAGAAGTGCAGATTGCGCCGTATAAT
CGCCAATTTGGTTCCAAACCTGTGTGGCAGCGGATTAAAGCAATTGCTGCAGGGCCGATTATGAACTTTATTTTAGCTTA
CGTCATTTTAGTGATGCTTGGGCTGATTCAAGGCGTACCGTCAAATGAACCTATGCTCGGGCAGCTGACAGACAATGGAC
GGGCAGCTGAAGCAGGGCTAAAAGAAGGGGATTATATCCAAAGCATTAACGGAGAGAAAATGAGGTCTTGGACTGACATT
GTCTCCGCTGTAAAAGAAAACCCGGAGAAAGAAATGGACGTTGCAGTAAAAAGAGCTAACAAAACGCTTCATATTTCGGT
GACTCCGGAAGCTGTTAAAGATGAGAACAAAAAAACAATCGGCCGCTTTGGTTCTTACGCGCCAACTGAGAAAGGCGTTC
TCTCAGCAGTTGCTTACGGCGCGACATCAACAGTTGACATTGGCAATCAAATCTTAGAAACGTTTGGTAATTTAGTAACA
GGACAATTTAAAATAAATATGTTGGCGGGACCAGTTGGTATTTATGATATGACAGACCAAGTGGCGAAAACCGGGTTAGT
TAATTTGGTTCGTTTCGCTGCGTTTTTAAGCATTAATCTTGGGATTGTCAACCTGCTTCCGATTCCGGCACTTGACGGAG
GAAGACTGTTGTTTCTATTTATTGAAGCGATTCGGGGCAAACCGATTAACAGGGAAAAAGAAGCATTTGTTGTGTTTATC
GGAGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGGCTGTTTTTGTAA

Domains

Predicted by InterProScan.

Peptidase family M50 (Peptidase_M50)

(8-408)

PDZ domain (PDZ_6)

(212-258)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.171

100

0.403
  eeP Streptococcus thermophilus LMG 18311

39.302

100

0.4