Detailed information NTG0640187

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: ODS73_RS11945
• Genome accession: NZ_CP107038
• Coordinates: 2278031..2279128 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266660.1
• Uniprot ID: Q97N44
• Organism: Streptococcus pneumoniae strain BM6001
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2273031..2284128

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ODS73_RS11920 (ODS73_11910)	pgsA	2273552..2274097 (-)	546	WP_000712136.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
ODS73_RS11925 (ODS73_11915)	rodZ	2274108..2274929 (-)	822	WP_284060586.1	cytoskeleton protein RodZ	-
ODS73_RS11930 (ODS73_11920)	yfmH	2274971..2276254 (-)	1284	WP_050237150.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
ODS73_RS11935 (ODS73_11925)	yfmF	2276251..2277501 (-)	1251	WP_000424271.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
ODS73_RS11940 (ODS73_11930)	yaaA	2277660..2278028 (+)	369	WP_000455904.1	S4 domain-containing protein YaaA	-
ODS73_RS11945 (ODS73_11935)	recF	2278031..2279128 (+)	1098	WP_000266660.1	DNA replication/repair protein RecF	Machinery gene
ODS73_RS11950 (ODS73_11940)	guaB	2279179..2280657 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
ODS73_RS11955 (ODS73_11945)	trpS	2280809..2281834 (-)	1026	WP_000165445.1	tryptophan--tRNA ligase	-
ODS73_RS11960 (ODS73_11950)	-	2282040..2283662 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41900.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=640187 ODS73_RS11945 WP_000266660.1 2278031..2279128(+) (recF) [Streptococcus pneumoniae strain BM6001]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=640187 ODS73_RS11945 WP_000266660.1 2278031..2279128(+) (recF) [Streptococcus pneumoniae strain BM6001]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAGGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q97N44

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46