Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   FH100_RS05575 Genome accession   NZ_CP090011
Coordinates   1124141..1124806 (+) Length   221 a.a.
NCBI ID   WP_002488207.1    Uniprot ID   -
Organism   Staphylococcus hominis strain acrlg     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1119141..1129806
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FH100_RS05545 (FH100_05530) - 1119280..1119837 (+) 558 WP_002488254.1 sugar transferase -
  FH100_RS05550 (FH100_05535) - 1119837..1120703 (+) 867 WP_002488283.1 NAD-dependent epimerase/dehydratase family protein -
  FH100_RS05555 (FH100_05540) - 1120720..1121655 (+) 936 WP_002488221.1 LCP family protein -
  FH100_RS05560 (FH100_05545) - 1121764..1123239 (-) 1476 WP_002488271.1 alkaline phosphatase -
  FH100_RS05565 (FH100_05550) - 1123620..1123793 (+) 174 WP_002449232.1 hypothetical protein -
  FH100_RS05570 (FH100_05555) - 1123961..1124128 (+) 168 WP_002488268.1 hypothetical protein -
  FH100_RS05575 (FH100_05560) braR 1124141..1124806 (+) 666 WP_002488207.1 response regulator transcription factor Regulator
  FH100_RS05580 (FH100_05565) braS 1124812..1125708 (+) 897 WP_002488276.1 sensor histidine kinase Regulator
  FH100_RS05585 (FH100_05570) - 1125840..1126589 (+) 750 WP_002488212.1 ABC transporter ATP-binding protein -
  FH100_RS05590 (FH100_05575) - 1126591..1128546 (+) 1956 WP_037555810.1 FtsX-like permease family protein -
  FH100_RS05595 (FH100_05580) - 1128634..1129398 (+) 765 WP_002449398.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25398.17 Da        Isoelectric Point: 4.6475

>NTDB_id=640175 FH100_RS05575 WP_002488207.1 1124141..1124806(+) (braR) [Staphylococcus hominis strain acrlg]
MKVLIVEDDVVIAESLGNELSHWNYEVSIAKQFGNILEEFKTAEPELVLLDINLPTFNGYHWCQEIRKVSNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLTVSNNEMTVKGCKLVVDEATLYYNNDSVQLSFTELQILN
KLFQNEGKYVNRTAIIEKCWESENFIDDNTLAVNMTRLRKKLQSIGIVDFIETKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=640175 FH100_RS05575 WP_002488207.1 1124141..1124806(+) (braR) [Staphylococcus hominis strain acrlg]
ATGAAAGTATTAATTGTCGAAGATGATGTCGTCATTGCAGAAAGTCTAGGGAATGAACTCTCACATTGGAACTATGAAGT
GAGTATTGCTAAGCAGTTTGGTAATATTCTTGAAGAATTTAAAACTGCAGAACCTGAACTTGTGTTATTAGATATTAATT
TACCTACATTTAATGGTTATCATTGGTGCCAAGAGATACGTAAAGTATCTAATGTCCCAATTATTTTCATTAGTTCGCGT
ACTGACAATATGGATCAAATTATGGCAATTCAAATGGGGGGAGATGACTTTATTGAAAAGCCATTTAATTTGTCACTTAC
TATAGCGAAAATTCAAGCATTGCTACGTAGAACATATGATTTAACGGTTTCAAATAATGAGATGACTGTTAAAGGGTGTA
AACTCGTTGTTGATGAAGCCACACTATACTACAACAATGACTCTGTACAACTTTCGTTTACTGAACTACAAATTTTGAAT
AAATTATTTCAAAATGAAGGGAAATATGTCAATCGTACAGCAATCATCGAAAAATGTTGGGAATCAGAGAATTTTATTGA
TGATAATACGTTAGCAGTAAATATGACACGCCTACGTAAAAAGCTGCAATCTATCGGTATTGTTGATTTCATTGAGACAA
AGAAAAATGTAGGATATAAGGTATAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

76.923

100

0.769