Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   LU301_RS02245 Genome accession   NZ_CP089978
Coordinates   447758..452107 (+) Length   1449 a.a.
NCBI ID   WP_305272129.1    Uniprot ID   -
Organism   Moraxella sp. ZY210820     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 442758..457107
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LU301_RS02220 (LU301_02210) - 443760..444365 (-) 606 WP_305272120.1 hypothetical protein -
  LU301_RS02225 (LU301_02215) pilG 444858..445241 (+) 384 WP_305272122.1 twitching motility response regulator PilG Regulator
  LU301_RS02230 (LU301_02220) - 445291..445662 (+) 372 WP_305272125.1 PleD family two-component system response regulator -
  LU301_RS02235 (LU301_02225) - 445677..446210 (+) 534 WP_305272127.1 chemotaxis protein CheW -
  LU301_RS02240 (LU301_02230) - 446578..447621 (+) 1044 Protein_433 methyl-accepting chemotaxis protein -
  LU301_RS02245 (LU301_02235) chpA 447758..452107 (+) 4350 WP_305272129.1 Hpt domain-containing protein Regulator
  LU301_RS02250 (LU301_02240) - 452107..452568 (+) 462 WP_305272131.1 hypothetical protein -
  LU301_RS02255 (LU301_02245) - 452619..452981 (-) 363 WP_305272132.1 hypothetical protein -
  LU301_RS02260 (LU301_02250) phoR 453091..454491 (-) 1401 WP_305272134.1 phosphate regulon sensor histidine kinase PhoR -
  LU301_RS02265 (LU301_02255) phoB 454507..455205 (-) 699 WP_305272136.1 phosphate regulon transcriptional regulator PhoB -
  LU301_RS02270 (LU301_02260) - 455414..456070 (+) 657 WP_305272138.1 response regulator transcription factor -

Sequence


Protein


Download         Length: 1449 a.a.        Molecular weight: 164547.47 Da        Isoelectric Point: 4.3793

>NTDB_id=639620 LU301_RS02245 WP_305272129.1 447758..452107(+) (chpA) [Moraxella sp. ZY210820]
MKTALKHLVDTITLPEDEYLEQDAEIFEIFVEEVEEILNELVELVPQWIADSQDQETLVTIRRYFHTLKGSGRMVGAKAS
GELAWTVESLLNNVISNNIELTTDIQRYVQTVVNLYQYKLLHEFKVVSAHQLDFRPLVLLGQRLQQQQNLEVELNDLLVL
ADTLTSSTVVTGLEVANDDNSKEVEEIQPHTDIVVATTELPSIDIAPEMLEIFLEESNENLIVVDSFLEQALPTTDDYNR
LVRALHTLRGSSAMVGLEKITKVSQYVEKSFEHKSTTDDIEVVAQSKQLLQDYKAFITQSLNSLQQQNTQQLNDLYDYFT
QQWSLENNALDDKDEQNTQGIVSTLLELDIGLLLDAEFDFEQNAQDSAYLQSLIEQTQNLVNYQHHKESLAIQDYSEKMG
RAYKSILEQPELLNNENVQQAFLNTHKQFVNLFDTLASGQSIETGLQLQVITRLLTVLDHQDTALTSEIEVSTNTSSVVT
QSAELDISTIVARIALDKQQIESEQINRDFDSDLLDIFLEEAEELQISIDQSLEQWSQDYTNINTLNSLMRYLHTLKGGA
NMIQATHLGLVTHELESIYENIIAQVIPVSLNLERLIRVLQDEVSERLQVLRDVKVDYPSTETVHILKNIMQYVAGGQVS
VEPTNDPEQSDTIVTTEPATEIVVAETVSSSIIEEDDDIDKIIETEFLDEAGILLNNAQELLTQWKDERTNRNVLLRLQR
TIHSLKGAARLAKRTEVSEVAAQLEHTFEQFAVHHFEAGIYDRTLQDTLRWFKPAIFNKDVSLVKTILQSLQNINYTQDK
VDDFVGETFIEDTVMGDGTEPPSMMGEWDTTEQVTNAEMIRISSDVIDKMLDLSGENSINRSRIEMDINSFASTLSEMEL
TIKRLADQLRRMQGELESQILARHGGEESRYEDFDPLEMDQYSSLNQLSKSLAESASDLIDFKTTLANKLSDTEGLLLQQ
FRLQNEMQESLMRTRLVPFSPMLPRLQRIVRQTSAKLDKPVEFITDSIDGEFDRNILEHLITPFEHMLRNALDHGLETRA
ERHRTIKPEAGRIELKIERQGTDVVATLSDDGRGIDVRKIRRKAIERGLMKEGEPLEREEILQFIFHHGFSTAQEVSDIS
GRGVGLDVVQSEIRELGGQLSVDSVYGEGTTFTIRVPTTVAMSDALMIKQGDQQYAVPLTQIERMVRISPEILETYFKSN
AEHLSIDNQNYRLRYLSELISDQPMPRFQDMNTPMPVLLLKSTGGQRVALLVDQSGSREQIVVKPIGEQFGSVGIIAGAT
ILGDGRVCLILDTANMIRQAQSTNRSRQVDEVKHKEKGRQRDQRHLVMIVDDSVTVRKVTSRLLERNGYDVITAKDGVDA
MEQLENVTPDLMLLDIEMPRMDGFEVTALVRRHETHKDLPIIMITSRTGEKHRERALSLGVSEYMGKPFQEDTLLSKIRS
YLTVDMGSK

Nucleotide


Download         Length: 4350 bp        

>NTDB_id=639620 LU301_RS02245 WP_305272129.1 447758..452107(+) (chpA) [Moraxella sp. ZY210820]
ATGAAAACTGCATTAAAACATTTGGTAGATACGATAACATTGCCCGAAGATGAATATTTGGAGCAAGATGCAGAAATTTT
TGAAATTTTTGTAGAGGAAGTGGAAGAAATTCTCAATGAGTTGGTTGAGTTAGTACCACAATGGATTGCGGATAGCCAAG
ATCAAGAAACATTGGTTACGATTCGCCGTTATTTTCATACTTTAAAAGGTTCGGGGCGTATGGTGGGTGCGAAAGCATCT
GGGGAATTGGCATGGACAGTAGAAAGTTTATTAAATAATGTCATCTCAAATAATATTGAATTAACGACTGATATTCAGCG
TTATGTACAAACTGTTGTTAATTTATATCAGTATAAATTATTGCATGAGTTTAAAGTAGTATCTGCTCATCAGTTAGATT
TTCGTCCGTTGGTTTTGTTGGGACAACGTTTACAACAGCAACAAAATTTAGAAGTAGAATTAAATGACTTATTGGTGTTA
GCAGATACTTTAACATCATCAACTGTGGTTACAGGTCTAGAAGTTGCAAATGACGATAATTCAAAAGAAGTGGAAGAAAT
TCAACCACATACAGATATTGTGGTGGCAACAACAGAATTACCAAGTATTGATATTGCTCCTGAAATGCTGGAAATTTTCT
TAGAAGAATCAAATGAAAATTTAATTGTTGTTGATTCTTTCTTGGAACAAGCATTACCAACAACAGATGATTATAATCGT
TTAGTGCGTGCATTACATACCTTGCGTGGTAGTTCTGCAATGGTGGGTTTGGAAAAAATTACCAAAGTCAGTCAATATGT
AGAAAAGAGTTTTGAGCATAAAAGTACAACTGATGATATAGAGGTTGTTGCACAATCAAAACAATTATTGCAAGACTATA
AAGCATTTATTACGCAGTCTCTAAATTCATTGCAACAACAAAATACTCAACAATTAAATGATTTGTATGATTATTTTACT
CAACAATGGTCTTTAGAAAATAATGCTTTAGACGATAAAGATGAGCAAAATACTCAAGGTATTGTGAGTACATTGTTGGA
ATTGGATATTGGTTTATTACTTGATGCCGAATTTGATTTTGAGCAAAATGCACAAGATTCTGCATATTTACAAAGTTTGA
TTGAGCAAACTCAAAATCTGGTCAATTATCAGCACCATAAAGAAAGTTTAGCTATTCAAGATTATAGTGAAAAAATGGGG
CGTGCTTATAAGAGTATTTTAGAGCAACCAGAATTATTAAATAATGAGAATGTGCAACAAGCATTTTTAAATACGCATAA
ACAATTTGTGAATTTGTTTGATACACTTGCCTCTGGACAGTCGATTGAAACAGGTTTACAACTTCAAGTTATTACACGCT
TATTGACGGTGTTAGACCATCAAGATACGGCATTAACATCAGAAATTGAAGTTAGTACAAATACTTCGTCTGTTGTTACT
CAAAGTGCTGAGTTGGATATTAGTACAATTGTAGCTCGTATAGCATTAGATAAACAACAAATTGAAAGTGAACAAATTAA
TCGTGATTTTGACTCAGATTTACTTGATATTTTCTTAGAAGAAGCTGAAGAGTTACAAATTAGCATTGATCAAAGTTTAG
AGCAATGGTCGCAAGATTATACAAATATAAATACTTTAAATAGTCTGATGCGTTATTTGCATACCTTGAAAGGTGGTGCG
AATATGATTCAAGCAACACATTTAGGTTTGGTTACGCATGAGTTAGAAAGTATTTATGAAAACATTATTGCTCAAGTTAT
TCCTGTTTCATTGAATTTGGAGCGTTTAATTCGTGTGTTACAAGACGAAGTTTCTGAGCGTTTACAAGTTCTGCGTGATG
TGAAAGTGGATTACCCATCAACAGAGACAGTGCATATATTGAAAAATATCATGCAATATGTTGCAGGTGGTCAAGTATCT
GTTGAGCCGACTAATGATCCAGAACAAAGTGATACAATTGTAACAACTGAGCCAGCAACAGAAATCGTGGTTGCTGAAAC
AGTATCATCATCTATTATAGAAGAAGATGATGATATTGATAAAATTATTGAAACTGAATTCTTGGATGAAGCAGGTATTT
TACTCAATAATGCACAAGAATTATTGACACAGTGGAAAGATGAACGTACTAACCGTAACGTATTATTACGTTTACAGCGT
ACTATTCATAGTTTAAAAGGTGCAGCACGTTTAGCAAAACGTACAGAAGTTTCTGAAGTGGCAGCACAATTAGAACATAC
TTTTGAACAATTCGCAGTACATCATTTTGAGGCGGGTATATATGACCGTACTTTACAAGATACTTTGCGTTGGTTCAAAC
CTGCAATTTTCAATAAAGATGTAAGTTTGGTTAAAACGATTTTGCAAAGTTTGCAAAATATTAATTATACACAAGATAAA
GTAGATGACTTTGTTGGTGAGACATTCATTGAAGATACAGTGATGGGTGATGGTACTGAACCACCATCGATGATGGGTGA
ATGGGATACTACCGAACAAGTAACAAATGCAGAGATGATTCGTATTTCATCTGATGTGATTGATAAAATGCTTGACTTAT
CTGGTGAGAACTCGATTAACCGTTCACGAATTGAAATGGATATTAACTCATTTGCATCAACCTTATCTGAAATGGAATTG
ACTATTAAGCGTCTTGCTGACCAGTTACGCCGAATGCAGGGTGAGTTAGAATCACAAATTTTAGCACGTCATGGCGGAGA
AGAGTCTCGTTATGAAGATTTTGACCCGTTGGAAATGGACCAATATTCATCATTAAACCAATTATCTAAATCGTTAGCAG
AATCTGCATCGGACTTAATCGACTTTAAAACGACATTAGCCAATAAGTTAAGTGATACAGAAGGTTTATTATTACAACAA
TTCCGTTTGCAAAATGAAATGCAAGAGAGTTTAATGCGTACTCGTTTGGTACCATTCTCACCGATGTTACCACGTTTACA
ACGTATTGTACGTCAAACATCTGCCAAATTAGATAAACCTGTTGAGTTTATTACAGATAGTATTGATGGGGAATTTGACC
GTAATATTTTAGAGCATTTGATTACACCATTTGAGCATATGTTGCGTAATGCACTAGATCATGGTTTAGAGACTCGAGCA
GAACGTCATCGTACCATTAAACCTGAGGCTGGACGTATTGAATTAAAAATTGAACGTCAAGGTACAGATGTAGTTGCAAC
TTTAAGTGATGATGGTCGTGGCATTGATGTGCGTAAAATTCGCCGTAAAGCGATTGAGCGTGGCTTAATGAAAGAGGGTG
AGCCATTAGAGCGTGAAGAAATTTTACAGTTTATTTTCCATCATGGTTTTAGTACAGCACAAGAAGTAAGTGATATTTCA
GGTCGTGGTGTCGGTTTAGATGTAGTACAAAGCGAAATTCGTGAGTTGGGTGGACAACTTAGTGTAGACTCAGTTTATGG
TGAAGGAACAACCTTTACTATTCGTGTACCAACAACGGTAGCAATGAGTGATGCCTTGATGATTAAACAAGGTGATCAAC
AATATGCAGTACCATTAACTCAAATTGAGCGTATGGTGCGTATTTCACCTGAAATCTTAGAAACTTATTTTAAGAGTAAT
GCTGAACATTTAAGTATAGACAACCAAAACTATCGTTTACGTTATTTATCAGAATTGATTTCTGATCAGCCAATGCCACG
TTTCCAAGATATGAATACACCAATGCCTGTATTGTTATTAAAAAGTACAGGTGGTCAGCGTGTTGCATTGTTAGTAGACC
AATCTGGTTCTCGTGAACAGATTGTAGTAAAACCAATTGGTGAACAGTTTGGTTCAGTAGGTATTATTGCTGGTGCAACG
ATTTTGGGTGATGGTCGTGTGTGTCTGATTTTAGATACAGCAAATATGATTCGTCAGGCTCAATCAACTAACCGTTCACG
TCAAGTGGATGAAGTTAAGCATAAAGAGAAAGGTCGTCAGCGTGATCAGCGTCATTTAGTAATGATTGTCGATGACTCAG
TAACAGTACGTAAAGTAACATCTCGTCTATTAGAGCGTAATGGTTATGATGTTATTACTGCTAAAGATGGTGTTGATGCG
ATGGAGCAACTTGAAAATGTTACACCTGACTTAATGTTACTTGATATTGAAATGCCACGTATGGACGGTTTCGAAGTAAC
GGCTTTAGTACGTCGTCATGAGACACATAAAGACTTACCGATTATCATGATTACATCACGTACTGGTGAAAAACATCGTG
AACGTGCATTATCATTAGGTGTAAGTGAATATATGGGTAAACCGTTCCAAGAAGATACTTTATTGAGTAAGATTCGTAGT
TATTTAACTGTAGATATGGGGAGTAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

51.845

100

0.543