Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LU301_RS02225 Genome accession   NZ_CP089978
Coordinates   444858..445241 (+) Length   127 a.a.
NCBI ID   WP_305272122.1    Uniprot ID   -
Organism   Moraxella sp. ZY210820     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 439858..450241
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LU301_RS02210 (LU301_02200) fadA 440188..441360 (-) 1173 WP_305272116.1 acetyl-CoA C-acyltransferase FadA -
  LU301_RS02215 (LU301_02205) fadB 441382..443535 (-) 2154 WP_305272118.1 fatty acid oxidation complex subunit alpha FadB -
  LU301_RS02220 (LU301_02210) - 443760..444365 (-) 606 WP_305272120.1 hypothetical protein -
  LU301_RS02225 (LU301_02215) pilG 444858..445241 (+) 384 WP_305272122.1 twitching motility response regulator PilG Regulator
  LU301_RS02230 (LU301_02220) - 445291..445662 (+) 372 WP_305272125.1 PleD family two-component system response regulator -
  LU301_RS02235 (LU301_02225) - 445677..446210 (+) 534 WP_305272127.1 chemotaxis protein CheW -
  LU301_RS02240 (LU301_02230) - 446578..447621 (+) 1044 Protein_433 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14261.49 Da        Isoelectric Point: 5.2044

>NTDB_id=639619 LU301_RS02225 WP_305272122.1 444858..445241(+) (pilG) [Moraxella sp. ZY210820]
MEDILKNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAETQPDIIFVDIMMPRLDGYQTCALLKNSQNFR
NIPVLMLSSKDGSFDQAKGRVVGANQYLTKPFSKDELIDAIRTHIQA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=639619 LU301_RS02225 WP_305272122.1 444858..445241(+) (pilG) [Moraxella sp. ZY210820]
ATGGAAGATATTCTTAAAAATCTTAAAGTTATGGTAATTGATGATTCAAAAACCATTCGTCGTACAGCTGAAACATTATT
GCAACGTGAAGGTTGTGAAGTGATTACTGCAGTTGATGGTTTTGAAGCATTGTCAAAAATTGCAGAAACACAACCTGATA
TTATTTTCGTTGATATTATGATGCCACGTCTTGATGGTTATCAAACTTGTGCATTATTAAAAAATTCACAAAATTTCCGT
AATATTCCAGTCTTAATGTTGTCAAGTAAAGATGGTTCATTTGACCAAGCAAAAGGTCGTGTAGTTGGTGCAAATCAATA
TTTAACTAAGCCATTTAGTAAAGATGAATTAATCGATGCAATTCGCACACATATTCAAGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

84.252

100

0.843
  vicR Streptococcus mutans UA159

42.857

93.701

0.402