Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | P795_RS01595 | Genome accession | NC_023028 |
| Coordinates | 343296..343769 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214067.1 | Uniprot ID | A0A7U3Y304 |
| Organism | Acinetobacter baumannii ZW85-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 338296..348769
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P795_RS01575 (P795_1535) | - | 338760..340865 (-) | 2106 | WP_001117590.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
| P795_RS18785 | - | 340905..341035 (-) | 131 | Protein_302 | hypothetical protein | - |
| P795_RS01580 (P795_1540) | rpoZ | 341073..341351 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| P795_RS01585 (P795_1545) | gmk | 341424..342053 (-) | 630 | WP_023896139.1 | guanylate kinase | - |
| P795_RS01590 (P795_1550) | ispH | 342176..343126 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| P795_RS01595 (P795_1555) | fimU | 343296..343769 (+) | 474 | WP_001214067.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| P795_RS01600 (P795_1560) | pilV | 343763..344323 (+) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| P795_RS01605 (P795_1565) | pilW | 344324..345325 (+) | 1002 | WP_023896140.1 | PilW family protein | Machinery gene |
| P795_RS01610 (P795_1570) | pilX | 345322..346140 (+) | 819 | WP_000149377.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16823.40 Da Isoelectric Point: 8.5355
>NTDB_id=63953 P795_RS01595 WP_001214067.1 343296..343769(+) (fimU) [Acinetobacter baumannii ZW85-1]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDGNQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDGNQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=63953 P795_RS01595 WP_001214067.1 343296..343769(+) (fimU) [Acinetobacter baumannii ZW85-1]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCAGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGGTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCAGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGGTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
99.363 |
100 |
0.994 |