Detailed information NTG0639126

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: LVB87_RS01725
• Genome accession: NZ_CP089925
• Coordinates: 353535..354965 (+)
• Length: 476 a.a.
• NCBI ID: WP_232899205.1
• Uniprot ID: -
• Organism: Lysobacter sp. KIS68-7
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 348535..359965

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LVB87_RS01705 (LVB87_01705)	-	348588..349646 (-)	1059	WP_232899201.1	DNA topoisomerase IB	-
LVB87_RS01710 (LVB87_01710)	sucD	349688..350563 (-)	876	WP_232899202.1	succinate--CoA ligase subunit alpha	-
LVB87_RS01715 (LVB87_01715)	sucC	350578..351744 (-)	1167	WP_232899203.1	ADP-forming succinate--CoA ligase subunit beta	-
LVB87_RS01720 (LVB87_01720)	-	351893..353479 (+)	1587	WP_232899204.1	ATP-binding protein	-
LVB87_RS01725 (LVB87_01725)	pilR	353535..354965 (+)	1431	WP_232899205.1	sigma-54 dependent transcriptional regulator	Regulator
LVB87_RS01730 (LVB87_01730)	-	355237..355683 (+)	447	WP_232899206.1	pilin	-
LVB87_RS01735 (LVB87_01735)	-	355766..357709 (+)	1944	WP_232899207.1	tetratricopeptide repeat protein	-
LVB87_RS01740 (LVB87_01740)	-	357709..359622 (+)	1914	WP_232899208.1	hypothetical protein	-

Sequence

Protein

• Length: 476 a.a.
• Molecular weight: 51314.81 Da
• Isoelectric Point: 6.2817

>NTDB_id=639126 LVB87_RS01725 WP_232899205.1 353535..354965(+) (pilR) [Lysobacter sp. KIS68-7]
MNDQRSALIVDDERDIRELLVLTLGRMGLRTETASSLAEARAQLAANRYDLCLTDMRLPDGSGIDLIGEISAQYPNTPVA
MITAFGNVDAAVEALKAGAFDFVSKPVDLAVLRGLVKHALDLPQKGSKRAAAVGAASDVLATRLYGNSPAIVSLKATLSK
VARSQAPVYIAGESGVGKELVARTIHEQGARATGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHVDKPGLFQAADGGTL
FLDEVAELPLPMQVKLLRAIQEKSIRPVGANTEVLVDVRILSATHKDLGALVAEARFRHDLYYRINVIELRVPPLRERRD
DLPGLADAILQRLAAAQGRPVPALTEDANEALRTYPFPGNVRELENILERALALAEDDRIEAADLRLPTNSPAPSAAPPL
VPASAMPSREPLVRDPRTADPRDSMTSALPSYIEEIERNAIQQALEDNRYNKTKAAAALGITFRALRYKLKKLGID

Nucleotide

• Length: 1431 bp

>NTDB_id=639126 LVB87_RS01725 WP_232899205.1 353535..354965(+) (pilR) [Lysobacter sp. KIS68-7]
ATGAACGACCAGAGAAGTGCATTGATCGTGGACGACGAGCGCGATATCCGCGAGCTCCTCGTCCTCACCCTCGGGCGCAT
GGGATTGCGCACGGAAACCGCATCGAGCCTCGCCGAAGCACGCGCGCAGCTCGCCGCGAACCGTTACGACCTGTGCCTCA
CCGACATGCGCCTGCCCGATGGCTCGGGCATCGACCTGATCGGCGAGATCTCCGCCCAATACCCGAACACGCCGGTCGCG
ATGATCACCGCGTTCGGCAACGTCGACGCCGCGGTGGAAGCGCTGAAGGCCGGCGCGTTCGACTTCGTCAGCAAGCCGGT
GGACCTCGCCGTGCTGCGCGGGCTGGTCAAGCACGCGCTCGACCTTCCGCAGAAGGGCAGCAAGCGCGCGGCCGCCGTCG
GCGCCGCGAGCGACGTGCTCGCCACGCGCCTGTATGGCAACTCGCCCGCCATCGTGTCGCTGAAGGCCACGCTCTCCAAG
GTCGCGCGCAGCCAGGCGCCGGTGTACATCGCCGGCGAATCGGGCGTTGGCAAGGAGCTCGTCGCCCGCACGATCCATGA
GCAGGGCGCGCGCGCGACCGGCCCGTTCGTGCCGGTGAACTGCGGCGCGATTCCCGCCGAGCTGATGGAAAGCGAATTCT
TCGGACACAAGAAGGGCAGCTTCACCGGCGCGCACGTCGACAAGCCCGGCCTGTTCCAGGCGGCCGACGGCGGCACGCTG
TTCCTCGACGAGGTCGCCGAGCTGCCGCTGCCGATGCAGGTCAAGCTGCTGCGCGCCATCCAGGAAAAGTCGATCCGCCC
CGTCGGCGCCAACACCGAAGTGCTGGTCGACGTGCGCATCCTGTCGGCCACCCACAAGGACCTCGGCGCGCTCGTCGCCG
AGGCCCGCTTCCGCCACGACCTGTACTACCGCATCAACGTCATCGAACTGCGCGTGCCGCCGCTGCGCGAGCGCCGCGAC
GACCTGCCCGGCCTGGCCGATGCGATCCTGCAGCGCCTCGCCGCCGCGCAGGGCCGCCCGGTTCCGGCACTGACCGAAGA
CGCGAACGAAGCGCTGCGCACCTACCCGTTCCCCGGCAACGTGCGCGAGCTGGAGAACATCCTCGAACGCGCGCTCGCGC
TGGCCGAGGACGACCGCATCGAAGCCGCCGACCTGCGCCTGCCGACCAATTCGCCCGCGCCTTCGGCTGCGCCGCCCCTG
GTGCCGGCGTCGGCGATGCCGTCCCGCGAACCGCTCGTGCGCGACCCGCGCACCGCCGACCCGCGCGACAGCATGACCAG
CGCGCTCCCGAGCTACATCGAGGAGATCGAGCGCAACGCCATCCAGCAGGCGCTCGAGGACAACCGCTACAACAAGACGA
AGGCCGCGGCGGCGTTGGGCATCACCTTCCGGGCGTTGCGGTACAAGTTGAAGAAGCTCGGAATCGATTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (145-310)

• Bacterial regulatory protein, Fis family (HTH_8) (433-473)

• Response regulator receiver domain (Response_reg) (8-114)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	60.888	99.37	0.605
pilR	Acinetobacter baumannii strain A118	49.257	98.95	0.487