Detailed information
Bioinformatically predicted
Overview
| Name | vraR | Type | Regulator |
| Locus tag | SLV14_RS17045 | Genome accession | NZ_CP106840 |
| Coordinates | 3975932..3976615 (-) | Length | 227 a.a. |
| NCBI ID | WP_018092972.1 | Uniprot ID | A0A640TGK4 |
| Organism | Streptomyces sp. Je 1-4 | ||
| Function | repress expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3970932..3981615
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLV14_RS17025 (SLV14_003414) | - | 3971829..3972821 (-) | 993 | WP_208681729.1 | Rossmann-like and DUF2520 domain-containing protein | - |
| SLV14_RS17030 (SLV14_003415) | - | 3973042..3974337 (+) | 1296 | WP_411577460.1 | threonine aldolase family protein | - |
| SLV14_RS17035 (SLV14_003416) | - | 3974406..3974651 (-) | 246 | WP_208681731.1 | hypothetical protein | - |
| SLV14_RS17040 (SLV14_003417) | - | 3974752..3975861 (+) | 1110 | WP_208681733.1 | DUF5937 family protein | - |
| SLV14_RS17045 (SLV14_003418) | vraR | 3975932..3976615 (-) | 684 | WP_018092972.1 | response regulator | Regulator |
| SLV14_RS17050 (SLV14_003419) | - | 3976726..3977931 (-) | 1206 | WP_263269953.1 | sensor histidine kinase | - |
| SLV14_RS17055 (SLV14_003420) | - | 3978104..3979138 (+) | 1035 | WP_263269955.1 | SAM-dependent methyltransferase | - |
| SLV14_RS17060 (SLV14_003421) | - | 3979183..3980325 (+) | 1143 | WP_018092969.1 | NADH-quinone oxidoreductase subunit D | - |
Sequence
Protein
Download Length: 227 a.a. Molecular weight: 24385.29 Da Isoelectric Point: 4.9911
>NTDB_id=638487 SLV14_RS17045 WP_018092972.1 3975932..3976615(-) (vraR) [Streptomyces sp. Je 1-4]
MTIRVMLVDDQVLLRTGFRMVLAAQPDMEVVAEAGNGVEALEVLRGTQVDVILMDVRMPHLDGVEATRRICEGGQKEGAP
KVLILTTFDLDEYAFSALKAGASGFMLKDVPPSELLAAIRAVESGDAVVAPSTTRRLLDRFTPMLPATSGEPSRPELERL
TDREREVLLLVAQGLSNGEIAARLVLSEATVKTHVGRILTKLSLRDRVQAVVLAYETGLVRAGGAGA
MTIRVMLVDDQVLLRTGFRMVLAAQPDMEVVAEAGNGVEALEVLRGTQVDVILMDVRMPHLDGVEATRRICEGGQKEGAP
KVLILTTFDLDEYAFSALKAGASGFMLKDVPPSELLAAIRAVESGDAVVAPSTTRRLLDRFTPMLPATSGEPSRPELERL
TDREREVLLLVAQGLSNGEIAARLVLSEATVKTHVGRILTKLSLRDRVQAVVLAYETGLVRAGGAGA
Nucleotide
Download Length: 684 bp
>NTDB_id=638487 SLV14_RS17045 WP_018092972.1 3975932..3976615(-) (vraR) [Streptomyces sp. Je 1-4]
ATGACCATCCGTGTGATGCTCGTCGACGACCAGGTGCTGCTGCGCACCGGTTTCCGGATGGTGCTGGCCGCACAGCCCGA
CATGGAGGTCGTCGCGGAGGCGGGCAACGGTGTGGAGGCCCTGGAAGTGCTGCGCGGCACCCAGGTCGATGTGATCCTCA
TGGACGTACGGATGCCGCATCTGGACGGTGTGGAGGCCACCCGGCGGATCTGCGAGGGCGGGCAGAAGGAGGGCGCCCCG
AAGGTGCTCATCCTGACCACCTTCGACCTGGACGAGTACGCCTTCTCCGCGCTGAAGGCCGGGGCCAGCGGCTTCATGCT
CAAGGACGTGCCGCCGAGTGAACTGCTCGCCGCGATCCGGGCGGTGGAGAGCGGCGACGCGGTCGTCGCACCGTCCACCA
CCCGCCGGCTCCTCGACCGCTTCACGCCGATGCTGCCCGCCACCTCCGGCGAACCGTCCCGGCCCGAGCTGGAGCGGCTG
ACGGACCGCGAGCGGGAGGTGCTGCTGCTGGTCGCCCAGGGCCTGTCGAACGGTGAGATCGCGGCGCGGCTGGTGCTCTC
CGAGGCCACGGTCAAAACCCATGTGGGCCGCATCCTGACCAAGCTGAGCCTCCGGGACCGCGTCCAGGCGGTGGTGCTGG
CGTACGAAACGGGGCTGGTGCGGGCCGGGGGAGCGGGGGCCTAG
ATGACCATCCGTGTGATGCTCGTCGACGACCAGGTGCTGCTGCGCACCGGTTTCCGGATGGTGCTGGCCGCACAGCCCGA
CATGGAGGTCGTCGCGGAGGCGGGCAACGGTGTGGAGGCCCTGGAAGTGCTGCGCGGCACCCAGGTCGATGTGATCCTCA
TGGACGTACGGATGCCGCATCTGGACGGTGTGGAGGCCACCCGGCGGATCTGCGAGGGCGGGCAGAAGGAGGGCGCCCCG
AAGGTGCTCATCCTGACCACCTTCGACCTGGACGAGTACGCCTTCTCCGCGCTGAAGGCCGGGGCCAGCGGCTTCATGCT
CAAGGACGTGCCGCCGAGTGAACTGCTCGCCGCGATCCGGGCGGTGGAGAGCGGCGACGCGGTCGTCGCACCGTCCACCA
CCCGCCGGCTCCTCGACCGCTTCACGCCGATGCTGCCCGCCACCTCCGGCGAACCGTCCCGGCCCGAGCTGGAGCGGCTG
ACGGACCGCGAGCGGGAGGTGCTGCTGCTGGTCGCCCAGGGCCTGTCGAACGGTGAGATCGCGGCGCGGCTGGTGCTCTC
CGAGGCCACGGTCAAAACCCATGTGGGCCGCATCCTGACCAAGCTGAGCCTCCGGGACCGCGTCCAGGCGGTGGTGCTGG
CGTACGAAACGGGGCTGGTGCGGGCCGGGGGAGCGGGGGCCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| vraR | Staphylococcus aureus N315 |
39.732 |
98.678 |
0.392 |
| degU | Bacillus subtilis subsp. subtilis str. 168 |
38.158 |
100 |
0.383 |