NTDB

Overview

Name	clpC	Type	Regulator
Locus tag	LU294_RS20450	Genome accession	NZ_CP089743
Coordinates	3935777..3938377 (-)	Length	866 a.a.
NCBI ID	WP_232685359.1	Uniprot ID	-
Organism	Bacillus paranthracis strain SHOU-BC01
Function	degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3930777..3943377

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LU294_RS20420 (LU294_20420)	fabF	3930929..3932167 (-)	1239	WP_000412651.1	beta-ketoacyl-ACP synthase II	-
LU294_RS20425 (LU294_20425)	fabH	3932199..3933131 (-)	933	WP_001100541.1	beta-ketoacyl-ACP synthase III	-
LU294_RS20430 (LU294_20430)	comZ	3933534..3933710 (-)	177	WP_009879752.1	ComZ family protein	Regulator
LU294_RS20435 (LU294_20435)	-	3933764..3934636 (-)	873	WP_000486163.1	NAD-dependent epimerase/dehydratase family protein	-
LU294_RS20440 (LU294_20440)	-	3934666..3935400 (-)	735	WP_000028705.1	hypothetical protein	-
LU294_RS20445 (LU294_20445)	-	3935557..3935739 (+)	183	WP_001211114.1	YjzD family protein	-
LU294_RS20450 (LU294_20450)	clpC	3935777..3938377 (-)	2601	WP_232685359.1	ATP-dependent chaperone ClpB	Regulator
LU294_RS20455 (LU294_20455)	-	3938589..3938768 (-)	180	WP_000531418.1	YjzC family protein	-
LU294_RS20460 (LU294_20460)	-	3939261..3940070 (+)	810	WP_001041235.1	Cof-type HAD-IIB family hydrolase	-
LU294_RS20465 (LU294_20465)	-	3940176..3940316 (+)	141	WP_000516816.1	hypothetical protein	-
LU294_RS20470 (LU294_20470)	-	3940317..3940514 (+)	198	WP_000527400.1	DUF3813 domain-containing protein	-
LU294_RS20475 (LU294_20475)	-	3940540..3941397 (-)	858	WP_000364453.1	YitT family protein	-
LU294_RS20480 (LU294_20480)	-	3941498..3941629 (+)	132	WP_001120845.1	DUF3941 domain-containing protein	-
LU294_RS20485 (LU294_20485)	prsA	3941759..3942616 (+)	858	WP_001214230.1	peptidylprolyl isomerase PrsA	-

Sequence

Protein

Download Length: 866 a.a. Molecular weight: 97508.46 Da Isoelectric Point: 5.1540

                                >NTDB_id=638454 LU294_RS20450 WP_232685359.1 3935777..3938377(-) (clpC) [Bacillus paranthracis strain SHOU-BC01]

MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEALKQGAENLIKKKPSVTGSGAE

AGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLLAFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQRVTSQNPEAT

YEALEKYGRDLVAEVRAGKIDPVIGRDSEIHRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI

FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD

EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA

CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE

HLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG

EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM

SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI

IMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHIT

VQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVHVK

Nucleotide

Download Length: 2601 bp

                                >NTDB_id=638454 LU294_RS20450 WP_232685359.1 3935777..3938377(-) (clpC) [Bacillus paranthracis strain SHOU-BC01]

ATGGACTTAAATCAAATGACAACAAAAACACAAGAGGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCACCATCA

AGAAGTAGATACTGTTCATCTCTTGTTTACATTATTAGAAGAGCAAGATGGGTTAGCAGTACGTATTTTTCAAAAAATGA

ACGTCGATATAGAAGCATTAAAACAAGGCGCCGAAAATTTAATTAAGAAAAAGCCTTCCGTAACGGGGAGCGGTGCAGAA

GCAGGTAAATTATATATAACAGGTGCTCTGCAACAACTACTTGTAAGAGCAGGAAAAGAAGCAGAGAAATTGCAAGATGA

TTACATTTCAGTGGAACATGTATTACTTGCTTTTACTGAAGAAAAAGGCGATATAAACCAATTATTTACAAGATTTCATA

TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACT

TATGAAGCGTTAGAAAAATATGGTCGTGATTTAGTAGCGGAAGTAAGAGCGGGGAAAATTGACCCTGTTATCGGCCGCGA

TAGTGAAATTCACCGCGTAATCCGCATTCTTTCACGTAAAACGAAAAACAACCCAGTTTTAATTGGTGAACCAGGTGTTG

GTAAAACAGCAATTGTTGAAGGGTTAGCACAGCGTATTGTGAAAAAGGATGTACCTGAAGGATTAAAAGATAGAACAATC

TTTGCATTAGATATGAGTGCGCTTGTAGCTGGAGCGAAATTCCGTGGTGAATTTGAAGAGCGTCTCCAAGCTGTATTAAA

TGAAATTAAAAAGAGTGAAGGACGCATTTTATTATTCATTGATGAACTTCACACAATCGTCGGCGCTGGTAAAACAGAAG

GCGCAATGGATGCAGGAAATATGTTAAAACCGATGCTTGCGCGTGGTGAACTGCATTGTATCGGGGCGACGACGTTAGAT

GAATATCGTAAATATATTGAGAAAGATCCAGCGCTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAACCAACTGTTGA

AGATACAATTTCCATTTTACGTGGTTTAAAAGAGCGCTTTGAAATTTATCATGGTGTAAATATTCATGACCGCGCGATTG

TAGCAGCATCAGTTTTATCAGATCGATATATTTCGGATCGTTTCTTACCGGATAAAGCAATTGATCTTGTTGACGAAGCG

TGCGCAACAATTCGTACAGAAATTGATTCTATGCCAACAGAATTAGATGAAGTAACGCGTCGCATTATGCAGCTGGAAAT

TGAAGAAGCAGCTCTTGGAAAAGAGAAAGACTTTGGTAGCCAAGAACGTCTAAAAACATTGCAACGTGAATTATCGGATT

TAAAAGAAGTGGCAAGTGGCATGAGAGCCAAATGGGAGAAAGAAAAAGAAGATATTCACAAAGTTCGTGACTTACGTGAA

CATTTAGAGCGTCTGCGCCGTGAATTAGAAGAAGCAGAAGGTAATTACGACTTAAATAGAGCAGCGGAACTTCGCCACGG

AAAAATTCCTGCAATTGAAAAAGAGTTAAAAGAAGCAGAAGAAATGGGCGCGAATAATAAACAAGAAAATCGTTTATTAC

GTGAGGAAGTAAGTGAAGAAGAGATTGCTGATATTGTTTCACGCTGGACTGGTATTCCTGTCGCAAAACTCGTTGAAGGT

GAACGTGAGAAATTATTACGATTAGAGCAAATTTTATCAGAGCGTGTTATCGGACAAGAAGAAGCGGTAAGCCTAGTATC

AGACGCAGTTCTTCGTGCTCGTGCTGGTATTAAAGACCCGAACCGTCCAATTGGTTCCTTCATCTTCTTAGGACCGACTG

GTGTTGGTAAAACAGAACTTGCAAAAACGTTAGCGCAGTCTTTATTTGATAGTGAAGAGCAAATGATTCGTATTGATATG

TCTGAGTACATGGAGAAACACGCTGTGTCACGCTTAATTGGTGCACCTCCTGGATATGTTGGATATGAAGAGGGCGGTCA

ATTAACAGAAGCAGTAAGACGTAAACCGTATTCTGTTATTTTGTTAGATGAAATCGAAAAAGCACATCCAGAAGTATTCA

ACATTTTATTACAAATGTTAGATGACGGACGCATTACAGATTCGCAAGGACGTACAGTAGACTTTAAAAACACAGTTATT

ATTATGACGTCAAATATTGGATCTGCTCATTTATTAGATGGATTAGAAGAAGATGGCTCAATTAAAGAGGAATCAAGAGA

ACTTGTCATGGGGCAATTAAGAGGACATTTCCGACCAGAGTTTTTAAATCGTGTCGACGAAATTATTTTATTCAAACCTC

TTACAACGAATGAAATTAAAGGTATTGTTGATAAAATTGTAAAAGAATTACAAGGCCGTTTAGCTGACCGTCATATTACG

GTACAATTAACAGACGCAGCGAAAGAGTTTGTTGTCGAAGCTGGCTTCGATCCAATGTACGGAGCTCGTCCGTTAAAACG

ATATGTACAGCGTCAAGTTGAGACGAAATTAGCGAGAGAATTAATTGCAGGAACGATTACTGACAATAGTCATGTAGTTG

TTGATGTAGAAAATAACGAATTAGTCGTTCATGTGAAGTAA