Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LU294_RS20430 Genome accession   NZ_CP089743
Coordinates   3933534..3933710 (-) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus paranthracis strain SHOU-BC01     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3928534..3938710
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LU294_RS20410 (LU294_20410) - 3929144..3929890 (-) 747 WP_000966137.1 YjbA family protein -
  LU294_RS20415 (LU294_20415) - 3930034..3930822 (-) 789 WP_000539323.1 DUF2268 domain-containing protein -
  LU294_RS20420 (LU294_20420) fabF 3930929..3932167 (-) 1239 WP_000412651.1 beta-ketoacyl-ACP synthase II -
  LU294_RS20425 (LU294_20425) fabH 3932199..3933131 (-) 933 WP_001100541.1 beta-ketoacyl-ACP synthase III -
  LU294_RS20430 (LU294_20430) comZ 3933534..3933710 (-) 177 WP_009879752.1 ComZ family protein Regulator
  LU294_RS20435 (LU294_20435) - 3933764..3934636 (-) 873 WP_000486163.1 NAD-dependent epimerase/dehydratase family protein -
  LU294_RS20440 (LU294_20440) - 3934666..3935400 (-) 735 WP_000028705.1 hypothetical protein -
  LU294_RS20445 (LU294_20445) - 3935557..3935739 (+) 183 WP_001211114.1 YjzD family protein -
  LU294_RS20450 (LU294_20450) clpC 3935777..3938377 (-) 2601 WP_232685359.1 ATP-dependent chaperone ClpB Regulator

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=638453 LU294_RS20430 WP_009879752.1 3933534..3933710(-) (comZ) [Bacillus paranthracis strain SHOU-BC01]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=638453 LU294_RS20430 WP_009879752.1 3933534..3933710(-) (comZ) [Bacillus paranthracis strain SHOU-BC01]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586