Detailed information NTG0638186

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: LUV29_RS02180
• Genome accession: NZ_CP089592
• Coordinates: 433430..434578 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis strain Bsi
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 428430..439578

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LUV29_RS02160 (LUV29_02160)	yclH	428807..429487 (-)	681	WP_003234507.1	ABC transporter ATP-binding protein	-
LUV29_RS02165 (LUV29_02165)	yclI	429503..430963 (-)	1461	WP_003234506.1	ABC transporter permease	-
LUV29_RS02170 (LUV29_02170)	yclJ	431176..431859 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
LUV29_RS02175 (LUV29_02175)	yclK	431846..433267 (+)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
LUV29_RS02180 (LUV29_02180)	rapC	433430..434578 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
LUV29_RS02185 (LUV29_02185)	phrC	434562..434684 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
LUV29_RS02190 (LUV29_02190)	yczM	434784..434873 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
LUV29_RS02195 (LUV29_02195)	yczN	434955..435068 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
LUV29_RS02200 (LUV29_02200)	thrD	435222..436586 (-)	1365	WP_003234493.1	aspartate kinase	-
LUV29_RS02205 (LUV29_02205)	ceuB	436971..437921 (+)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
LUV29_RS02210 (LUV29_02210)	yclO	437914..438861 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=638186 LUV29_RS02180 WP_003246686.1 433430..434578(+) (rapC) [Bacillus subtilis strain Bsi]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=638186 LUV29_RS02180 WP_003246686.1 433430..434578(+) (rapC) [Bacillus subtilis strain Bsi]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571