Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   LUS72_RS20680 Genome accession   NZ_CP089518
Coordinates   3994357..3995151 (-) Length   264 a.a.
NCBI ID   WP_000411416.1    Uniprot ID   A0A1G4L491
Organism   Bacillus cereus strain PT1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 3989357..4000151
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUS72_RS20655 yqiS 3989430..3990329 (-) 900 WP_097830741.1 phosphate butyryltransferase -
  LUS72_RS20660 - 3990525..3992597 (-) 2073 WP_097830739.1 sigma-54 interaction domain-containing protein -
  LUS72_RS20665 - 3992735..3992968 (+) 234 WP_001190193.1 DUF2627 domain-containing protein -
  LUS72_RS20670 - 3993020..3993748 (-) 729 WP_097830738.1 glycerophosphodiester phosphodiesterase -
  LUS72_RS20675 - 3993799..3993945 (+) 147 WP_097830737.1 YycC family protein -
  LUS72_RS20680 spo0A 3994357..3995151 (-) 795 WP_000411416.1 sporulation transcription factor Spo0A Regulator
  LUS72_RS20685 spoIVB 3995439..3996731 (-) 1293 WP_264448227.1 SpoIVB peptidase -
  LUS72_RS20690 recN 3996850..3998589 (-) 1740 WP_097831045.1 DNA repair protein RecN Machinery gene
  LUS72_RS20695 argR 3998860..3999309 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 29427.13 Da        Isoelectric Point: 7.1176

>NTDB_id=637889 LUS72_RS20680 WP_000411416.1 3994357..3995151(-) (spo0A) [Bacillus cereus strain PT1]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=637889 LUS72_RS20680 WP_000411416.1 3994357..3995151(-) (spo0A) [Bacillus cereus strain PT1]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTGGTATCAATGCTAGAGAGCTATGTTGCTGCTCAGGA
TGATATGGAAGTAATCGGAACTGCTTACAATGGTCAAGAATGTTTAAACTTATTGACAGACAAGCAGCCTGATGTACTCG
TTTTAGACATTATTATGCCACATTTAGATGGTCTAGCTGTGCTAGAGAAAATGCGACATATTGAAAGGTTAAGACAACCT
AGCGTTATTATGTTGACAGCGTTTGGACAAGAAGATGTGACGAAAAAAGCGGTTGATTTAGGTGCATCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAATGCTACCATTAAACGTCCAT
TACCATCTTTCCGATCAGCAACAACGATCGATGGAAAACCGAAAAACTTAGATGCGAGTATTACAAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGGTACATGTACTTACGAGAAGCAATCTCTATGGTGTACAATGATATCGAATTACT
AGGATCTATTACGAAAGTATTATATCCAGATATCGCAAAGAAATATAATACAACAGCAAGTCGTGTCGAGCGCGCAATCC
GTCACGCAATTGAAGTGGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTTGGTTATACTGTATCGATGTCA
AAAGCAAAACCTACGAATTCCGAGTTTATCGCAATGGTTGCGGATAAGCTAAGACTTGAACATAAGGCTTCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1G4L491

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.524

100

0.814