Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   LUY95_RS06455 Genome accession   NZ_CP089506
Coordinates   1227040..1228026 (-) Length   328 a.a.
NCBI ID   WP_000959276.1    Uniprot ID   A0AAJ4YXL4
Organism   Staphylococcus aureus strain 0.0066_IIV_ST239     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1222040..1233026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUY95_RS06430 - 1222300..1222647 (-) 348 WP_001242102.1 hypothetical protein -
  LUY95_RS06435 - 1222833..1223426 (+) 594 WP_000224620.1 CYTH domain-containing protein -
  LUY95_RS06440 - 1223530..1223895 (+) 366 WP_000214067.1 truncated hemoglobin YjbI -
  LUY95_RS06445 yjbH 1223918..1224724 (+) 807 WP_000896692.1 protease adaptor protein YjbH -
  LUY95_RS06450 pepF 1225184..1226992 (-) 1809 WP_000082722.1 oligoendopeptidase F -
  LUY95_RS06455 coiA 1227040..1228026 (-) 987 WP_000959276.1 competence protein CoiA Machinery gene
  LUY95_RS06460 mecA 1228147..1228866 (-) 720 WP_001217728.1 adaptor protein MecA -
  LUY95_RS06465 spxA 1229237..1229632 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  LUY95_RS06470 trpS 1229927..1230916 (+) 990 WP_000448933.1 tryptophan--tRNA ligase -
  LUY95_RS06475 - 1230943..1232589 (-) 1647 WP_001794171.1 IS1182-like element ISSau3 family transposase -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38741.30 Da        Isoelectric Point: 9.6486

>NTDB_id=637781 LUY95_RS06455 WP_000959276.1 1227040..1228026(-) (coiA) [Staphylococcus aureus strain 0.0066_IIV_ST239]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIIMFQQIQYLGGHKYVAEKKNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDHEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=637781 LUY95_RS06455 WP_000959276.1 1227040..1228026(-) (coiA) [Staphylococcus aureus strain 0.0066_IIV_ST239]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATTATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAAGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTACAG
TTAACTGATCACGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-307)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus MW2

96.951

100

0.97
  coiA Staphylococcus aureus N315

96.951

100

0.97