Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   LUY98_RS05695 Genome accession   NZ_CP089497
Coordinates   1120988..1121974 (-) Length   328 a.a.
NCBI ID   WP_061843486.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 3045_IIV_ST8     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1115988..1126974
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUY98_RS05670 - 1116248..1116595 (-) 348 WP_001242107.1 hypothetical protein -
  LUY98_RS05675 - 1116781..1117374 (+) 594 WP_000224618.1 CYTH domain-containing protein -
  LUY98_RS05680 - 1117478..1117843 (+) 366 WP_000214067.1 truncated hemoglobin YjbI -
  LUY98_RS05685 yjbH 1117866..1118672 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  LUY98_RS05690 pepF 1119132..1120940 (-) 1809 WP_000082717.1 oligoendopeptidase F -
  LUY98_RS05695 coiA 1120988..1121974 (-) 987 WP_061843486.1 competence protein CoiA Machinery gene
  LUY98_RS05700 mecA 1122095..1122814 (-) 720 WP_001217728.1 adaptor protein MecA -
  LUY98_RS05705 spxA 1123186..1123581 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  LUY98_RS05710 trpS 1123876..1124865 (+) 990 WP_000448934.1 tryptophan--tRNA ligase -
  LUY98_RS05715 - 1125151..1126797 (+) 1647 WP_000277741.1 IS1182-like element ISSau3 family transposase -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38889.60 Da        Isoelectric Point: 9.8057

>NTDB_id=637567 LUY98_RS05695 WP_061843486.1 1120988..1121974(-) (coiA) [Staphylococcus aureus strain 3045_IIV_ST8]
MLVALNEEKERVLATTALRKIKYFCPVCGKQVILKRGLKVISHFAHKHLTEQKCFNNESFKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCYNKVKFNHFQSIFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIEKHPIEWQLQVDLWLKNGKSKLLSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSNR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=637567 LUY98_RS05695 WP_061843486.1 1120988..1121974(-) (coiA) [Staphylococcus aureus strain 3045_IIV_ST8]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGATAAAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAACGGAACAAAAAT
GTTTTAATAATGAATCGTTTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAACCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTTATAATAAAGTGAAGTTCAATCATTTTCAAAGTATATTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATACTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAAACATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTACTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAAATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-305)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

95.427

100

0.954
  coiA Staphylococcus aureus MW2

95.122

100

0.951