Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   LUZ02_RS02845 Genome accession   NZ_CP089491
Coordinates   605382..606368 (-) Length   328 a.a.
NCBI ID   WP_000959286.1    Uniprot ID   A0AAX2MRT0
Organism   Staphylococcus aureus strain 0242_IV_ST30     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 600382..611368
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUZ02_RS02820 - 600642..600989 (-) 348 WP_001242102.1 hypothetical protein -
  LUZ02_RS02825 - 601175..601768 (+) 594 WP_000224621.1 CYTH domain-containing protein -
  LUZ02_RS02830 - 601872..602237 (+) 366 WP_000214070.1 truncated hemoglobin YjbI -
  LUZ02_RS02835 yjbH 602260..603066 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  LUZ02_RS02840 pepF 603526..605334 (-) 1809 WP_000082725.1 oligoendopeptidase F -
  LUZ02_RS02845 coiA 605382..606368 (-) 987 WP_000959286.1 competence protein CoiA Machinery gene
  LUZ02_RS02850 mecA 606489..607208 (-) 720 WP_001217724.1 adaptor protein MecA -
  LUZ02_RS02855 tnpA 607624..608109 (-) 486 WP_000093392.1 IS200/IS605 family transposase -
  LUZ02_RS02860 spxA 608321..608716 (-) 396 WP_000258001.1 transcriptional regulator SpxA -
  LUZ02_RS02865 trpS 609011..610000 (+) 990 WP_000448941.1 tryptophan--tRNA ligase -
  LUZ02_RS02870 - 610026..610535 (-) 510 Protein_569 transposase -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38770.45 Da        Isoelectric Point: 9.5881

>NTDB_id=637420 LUZ02_RS02845 WP_000959286.1 605382..606368(-) (coiA) [Staphylococcus aureus strain 0242_IV_ST30]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLLLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=637420 LUZ02_RS02845 WP_000959286.1 605382..606368(-) (coiA) [Staphylococcus aureus strain 0242_IV_ST30]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTTGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCCGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCTATTGAGTG
GCAATTACAAGTTGATTTATTGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAACCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

99.085

100

0.991
  coiA Staphylococcus aureus MW2

97.866

100

0.979