Detailed information NTG0063713

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: U712_RS02120
• Genome accession: NC_022898
• Coordinates: 428823..429971 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis PY79
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 423823..434971

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U712_RS02100 (U712_01930)	yclH	424200..424880 (-)	681	WP_003234507.1	ABC transporter ATP-binding protein	-
U712_RS02105 (U712_01935)	yclI	424896..426356 (-)	1461	WP_003234506.1	ABC transporter permease	-
U712_RS02110 (U712_01940)	yclJ	426569..427252 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
U712_RS02115 (U712_01945)	yclK	427239..428660 (+)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
U712_RS02120 (U712_01950)	rapC	428823..429971 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
U712_RS02125 (U712_01955)	phrC	429955..430077 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
U712_RS20210 (U712_01960)	yczM	430177..430266 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
U712_RS20215 (U712_01965)	yczN	430348..430461 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
U712_RS02140 (U712_01970)	thrD	430615..431979 (-)	1365	WP_009966541.1	aspartate kinase	-
U712_RS02145 (U712_01975)	ceuB	432364..433314 (+)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
U712_RS02150 (U712_01980)	yclO	433307..434254 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=63713 U712_RS02120 WP_003246686.1 428823..429971(+) (rapC) [Bacillus subtilis PY79]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=63713 U712_RS02120 WP_003246686.1 428823..429971(+) (rapC) [Bacillus subtilis PY79]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571