Detailed information NTG0636787

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: LLE35_RS05175
• Genome accession: NZ_CP106773
• Coordinates: 969056..970300 (-)
• Length: 414 a.a.
• NCBI ID: WP_003693001.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 10562
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 964056..975300

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLE35_RS05145 (LLE35_05110)	-	964260..965648 (+)	1389	WP_003693004.1	DEAD/DEAH box helicase	-
LLE35_RS05155 (LLE35_05120)	-	965999..966199 (-)	201	WP_003693002.1	hypothetical protein	-
LLE35_RS05160 (LLE35_05125)	-	966213..966767 (-)	555	WP_003688863.1	hypothetical protein	-
LLE35_RS05165 (LLE35_05130)	-	966852..967352 (-)	501	WP_010357954.1	hypothetical protein	-
LLE35_RS05170 (LLE35_05135)	-	967756..968949 (+)	1194	WP_003688867.1	aspartate aminotransferase family protein	-
LLE35_RS05175 (LLE35_05140)	clpX	969056..970300 (-)	1245	WP_003693001.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
LLE35_RS05180 (LLE35_05145)	rbfA	970483..970854 (+)	372	WP_003692998.1	30S ribosome-binding factor RbfA	-
LLE35_RS05185 (LLE35_05150)	-	970865..971389 (+)	525	WP_003688872.1	hypothetical protein	-
LLE35_RS05190 (LLE35_05155)	truB	971447..972367 (+)	921	WP_003688873.1	tRNA pseudouridine(55) synthase TruB	-
LLE35_RS05195 (LLE35_05160)	-	972584..974826 (+)	2243	Protein_1013	DNA methyltransferase	-

Sequence

Protein

• Length: 414 a.a.
• Molecular weight: 44879.29 Da
• Isoelectric Point: 4.8622

>NTDB_id=636787 LLE35_RS05175 WP_003693001.1 969056..970300(-) (clpX) [Neisseria gonorrhoeae strain 10562]
MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCLEILYEGDNGGTPPENAGGEPEESGKLPTPAEIVANLDDYVIG
QGQAKKALAVAVYNHYKRLRHPKADGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
IITKLLGKCDFDVEKAQHGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDT
ANILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSKDENAGITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDA
LINILTEPKNALVKQYQALFCIENVGLEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRLPDLQGLKKVVVGKA
VIEEGREPELVFES

Nucleotide

• Length: 1245 bp

>NTDB_id=636787 LLE35_RS05175 WP_003693001.1 969056..970300(-) (clpX) [Neisseria gonorrhoeae strain 10562]
ATGTCCAACGAAAACCGTACCTGTTCCTTTTGCGGAAAATCCAAATCACACGTCAAACATTTGATTGAGGGCGAAAACGC
CTTTATCTGCGACGAATGCGTCTCAAACTGCCTCGAAATATTGTACGAAGGCGACAACGGCGGCACGCCTCCGGAAAATG
CCGGAGGGGAGCCGGAAGAATCCGGCAAACTGCCCACGCCCGCCGAAATCGTTGCCAACCTCGACGATTATGTCATCGGG
CAGGGGCAGGCGAAAAAGGCGCTGGCGGTTGCGGTTTACAACCATTACAAACGCCTGCGCCACCCGAAAGCCGACGGCGG
TGTCGAATTGTCGAAATCCAACATCCTGCTTATCGGCCCGACCGGATCGGGTAAAACGCTGTTGGCGCAATCTTTGGCAC
GCAAACTGGACGTGCCGTTCGTGATGGCGGATGCGACCACGCTGACCGAAGCCGGCTATGTCGGCGAAGATGTCGAACAA
ATCATTACCAAACTGTTGGGCAAATGCGATTTCGATGTCGAAAAAGCCCAGCACGGCATTGTCTATATTGACGAAATTGA
CAAAATTTCGCGTAAAAGCGACAACCCGTCCATCACGCGCGACGTGTCCGGCGAAGGCGTGCAGCAAGCCTTGCTGAAAC
TGATTGAAGGTACGGTGGCAAGCGTTCCGCCCCAAGGCGGACGCAAGCATCCGAATCAGGAATTTATCAACGTTGATACC
GCCAACATCCTGTTTATCTGCGGCGGCGCGTTTGCAGGCTTGGAAAAAGTGATTCGCCAGCGCACCGAGAAAGGTGGTAT
CGGTTTCGGCGCGTCCGTTCACAGCAAGGACGAAAATGCCGGCATTACCAAGCTGTTCGGCATCGTCGAACCGGAAGATT
TAATCAAATTCGGCCTGATTCCGGAATTAATCGGACGTTTGCCCGTGATTGCAACTTTAGAAGAACTGGATGAGGACGCG
CTGATTAATATTTTAACCGAGCCGAAAAACGCTTTGGTCAAGCAGTATCAAGCCTTGTTCTGCATAGAAAACGTCGGGTT
GGAATTTGAAGAAGGCGCATTGCGTTCCATCGCGCGGCAGGCAATGGAACGCAAAACCGGCGCGCGCGGCCTGCGTTCCA
TCGTCGAACGCTGCCTGCTCGATACGATGTACCGCCTGCCCGATTTGCAAGGCTTGAAAAAAGTGGTGGTCGGCAAGGCA
GTCATCGAAGAGGGCAGGGAACCGGAATTGGTGTTCGAGTCCTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (112-310)

• ClpX C4-type zinc finger (zf-C4_ClpX) (7-42)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (316-387)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	56.28	100	0.563
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.448	99.758	0.553