Detailed information NTG0636713

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: LLE28_RS05110
• Genome accession: NZ_CP106771
• Coordinates: 964014..965258 (-)
• Length: 414 a.a.
• NCBI ID: WP_003693001.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 10531
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 959014..970258

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLE28_RS05080	-	959218..960606 (+)	1389	WP_003693004.1	DEAD/DEAH box helicase	-
LLE28_RS05090	-	960957..961157 (-)	201	WP_003693002.1	hypothetical protein	-
LLE28_RS05095	-	961171..961725 (-)	555	WP_003688863.1	hypothetical protein	-
LLE28_RS05100	-	961810..962310 (-)	501	WP_010357954.1	hypothetical protein	-
LLE28_RS05105	-	962714..963907 (+)	1194	WP_003688867.1	aspartate aminotransferase family protein	-
LLE28_RS05110	clpX	964014..965258 (-)	1245	WP_003693001.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
LLE28_RS05115	rbfA	965441..965812 (+)	372	WP_229930558.1	30S ribosome-binding factor RbfA	-
LLE28_RS05120	-	965823..966347 (+)	525	WP_003688872.1	hypothetical protein	-
LLE28_RS05125	truB	966405..967325 (+)	921	WP_003688873.1	tRNA pseudouridine(55) synthase TruB	-
LLE28_RS05130	-	967542..969784 (+)	2243	Protein_1005	DNA methyltransferase	-

Sequence

Protein

• Length: 414 a.a.
• Molecular weight: 44879.29 Da
• Isoelectric Point: 4.8622

>NTDB_id=636713 LLE28_RS05110 WP_003693001.1 964014..965258(-) (clpX) [Neisseria gonorrhoeae strain 10531]
MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCLEILYEGDNGGTPPENAGGEPEESGKLPTPAEIVANLDDYVIG
QGQAKKALAVAVYNHYKRLRHPKADGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
IITKLLGKCDFDVEKAQHGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDT
ANILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSKDENAGITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDA
LINILTEPKNALVKQYQALFCIENVGLEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRLPDLQGLKKVVVGKA
VIEEGREPELVFES

Nucleotide

• Length: 1245 bp

>NTDB_id=636713 LLE28_RS05110 WP_003693001.1 964014..965258(-) (clpX) [Neisseria gonorrhoeae strain 10531]
ATGTCCAACGAAAACCGTACCTGTTCCTTTTGCGGAAAATCCAAATCACACGTCAAACATTTGATTGAGGGCGAAAACGC
CTTTATCTGCGACGAATGCGTCTCAAACTGCCTCGAAATATTGTACGAAGGCGACAACGGCGGCACGCCTCCGGAAAATG
CCGGAGGGGAGCCGGAAGAATCCGGCAAACTGCCCACGCCCGCCGAAATCGTTGCCAACCTCGACGATTATGTCATCGGG
CAGGGGCAGGCGAAAAAGGCGCTGGCGGTTGCGGTTTACAACCATTACAAACGCCTGCGCCACCCGAAAGCCGACGGCGG
TGTCGAATTGTCGAAATCCAACATCCTGCTTATCGGCCCGACCGGATCGGGTAAAACGCTGTTGGCGCAATCTTTGGCAC
GCAAACTGGACGTGCCGTTCGTGATGGCGGATGCGACCACGCTGACCGAAGCCGGCTATGTCGGCGAAGATGTCGAACAA
ATCATTACCAAACTGTTGGGCAAATGCGATTTCGATGTCGAAAAAGCCCAGCACGGCATTGTCTATATTGACGAAATTGA
CAAAATTTCGCGTAAAAGCGACAACCCGTCCATCACGCGCGACGTGTCCGGCGAAGGCGTGCAGCAAGCCTTGCTGAAAC
TGATTGAAGGTACGGTGGCAAGCGTTCCGCCCCAAGGCGGACGCAAGCATCCGAATCAGGAATTTATCAACGTTGATACC
GCCAACATCCTGTTTATCTGCGGCGGCGCGTTTGCAGGCTTGGAAAAAGTGATTCGCCAGCGCACCGAGAAAGGTGGTAT
CGGTTTCGGCGCGTCCGTTCACAGCAAGGACGAAAATGCCGGCATTACCAAGCTGTTCGGCATCGTCGAACCGGAAGATT
TAATCAAATTCGGCCTGATTCCGGAATTAATCGGACGTTTGCCCGTGATTGCAACTTTAGAAGAACTGGATGAGGACGCG
CTGATTAATATTTTAACCGAGCCGAAAAACGCTTTGGTCAAGCAGTATCAAGCCTTGTTCTGCATAGAAAACGTCGGGTT
GGAATTTGAAGAAGGCGCATTGCGTTCCATCGCGCGGCAGGCAATGGAACGCAAAACCGGCGCGCGCGGCCTGCGTTCCA
TCGTCGAACGCTGCCTGCTCGATACGATGTACCGCCTGCCCGATTTGCAAGGCTTGAAAAAAGTGGTGGTCGGCAAGGCA
GTCATCGAAGAGGGCAGGGAACCGGAATTGGTGTTCGAGTCCTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (112-310)

• ClpX C4-type zinc finger (zf-C4_ClpX) (7-42)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (316-387)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	56.28	100	0.563
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.448	99.758	0.553