Detailed information NTG0636494

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: LLE30_RS05090
• Genome accession: NZ_CP106765
• Coordinates: 963353..964597 (-)
• Length: 414 a.a.
• NCBI ID: WP_003693001.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 10500
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 958353..969597

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLE30_RS05060 (LLE30_05060)	-	958557..959945 (+)	1389	WP_003693004.1	DEAD/DEAH box helicase	-
LLE30_RS05070 (LLE30_05070)	-	960296..960496 (-)	201	WP_003693002.1	hypothetical protein	-
LLE30_RS05075 (LLE30_05075)	-	960510..961064 (-)	555	WP_003688863.1	hypothetical protein	-
LLE30_RS05080 (LLE30_05080)	-	961149..961649 (-)	501	WP_010357954.1	hypothetical protein	-
LLE30_RS05085 (LLE30_05085)	-	962053..963246 (+)	1194	WP_003688867.1	aspartate aminotransferase family protein	-
LLE30_RS05090 (LLE30_05090)	clpX	963353..964597 (-)	1245	WP_003693001.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
LLE30_RS05095 (LLE30_05095)	rbfA	964780..965151 (+)	372	WP_003692998.1	30S ribosome-binding factor RbfA	-
LLE30_RS05100 (LLE30_05100)	-	965162..965686 (+)	525	WP_003688872.1	hypothetical protein	-
LLE30_RS05105 (LLE30_05105)	truB	965744..966664 (+)	921	WP_003688873.1	tRNA pseudouridine(55) synthase TruB	-
LLE30_RS05110 (LLE30_05110)	-	966881..969135 (+)	2255	Protein_1000	DNA methyltransferase	-

Sequence

Protein

• Length: 414 a.a.
• Molecular weight: 44879.29 Da
• Isoelectric Point: 4.8622

>NTDB_id=636494 LLE30_RS05090 WP_003693001.1 963353..964597(-) (clpX) [Neisseria gonorrhoeae strain 10500]
MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCLEILYEGDNGGTPPENAGGEPEESGKLPTPAEIVANLDDYVIG
QGQAKKALAVAVYNHYKRLRHPKADGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
IITKLLGKCDFDVEKAQHGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDT
ANILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSKDENAGITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDA
LINILTEPKNALVKQYQALFCIENVGLEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRLPDLQGLKKVVVGKA
VIEEGREPELVFES

Nucleotide

• Length: 1245 bp

>NTDB_id=636494 LLE30_RS05090 WP_003693001.1 963353..964597(-) (clpX) [Neisseria gonorrhoeae strain 10500]
ATGTCCAACGAAAACCGTACCTGTTCCTTTTGCGGAAAATCCAAATCACACGTCAAACATTTGATTGAGGGCGAAAACGC
CTTTATCTGCGACGAATGCGTCTCAAACTGCCTCGAAATATTGTACGAAGGCGACAACGGCGGCACGCCTCCGGAAAATG
CCGGAGGGGAGCCGGAAGAATCCGGCAAACTGCCCACGCCCGCCGAAATCGTTGCCAACCTCGACGATTATGTCATCGGG
CAGGGGCAGGCGAAAAAGGCGCTGGCGGTTGCGGTTTACAACCATTACAAACGCCTGCGCCACCCGAAAGCCGACGGCGG
TGTCGAATTGTCGAAATCCAACATCCTGCTTATCGGCCCGACCGGATCGGGTAAAACGCTGTTGGCGCAATCTTTGGCAC
GCAAACTGGACGTGCCGTTCGTGATGGCGGATGCGACCACGCTGACCGAAGCCGGCTATGTCGGCGAAGATGTCGAACAA
ATCATTACCAAACTGTTGGGCAAATGCGATTTCGATGTCGAAAAAGCCCAGCACGGCATTGTCTATATTGACGAAATTGA
CAAAATTTCGCGTAAAAGCGACAACCCGTCCATCACGCGCGACGTGTCCGGCGAAGGCGTGCAGCAAGCCTTGCTGAAAC
TGATTGAAGGTACGGTGGCAAGCGTTCCGCCCCAAGGCGGACGCAAGCATCCGAATCAGGAATTTATCAACGTTGATACC
GCCAACATCCTGTTTATCTGCGGCGGCGCGTTTGCAGGCTTGGAAAAAGTGATTCGCCAGCGCACCGAGAAAGGTGGTAT
CGGTTTCGGCGCGTCCGTTCACAGCAAGGACGAAAATGCCGGCATTACCAAGCTGTTCGGCATCGTCGAACCGGAAGATT
TAATCAAATTCGGCCTGATTCCGGAATTAATCGGACGTTTGCCCGTGATTGCAACTTTAGAAGAACTGGATGAGGACGCG
CTGATTAATATTTTAACCGAGCCGAAAAACGCTTTGGTCAAGCAGTATCAAGCCTTGTTCTGCATAGAAAACGTCGGGTT
GGAATTTGAAGAAGGCGCATTGCGTTCCATCGCGCGGCAGGCAATGGAACGCAAAACCGGCGCGCGCGGCCTGCGTTCCA
TCGTCGAACGCTGCCTGCTCGATACGATGTACCGCCTGCCCGATTTGCAAGGCTTGAAAAAAGTGGTGGTCGGCAAGGCA
GTCATCGAAGAGGGCAGGGAACCGGAATTGGTGTTCGAGTCCTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (112-310)

• ClpX C4-type zinc finger (zf-C4_ClpX) (7-42)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (316-387)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	56.28	100	0.563
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.448	99.758	0.553