Detailed information NTG0063594

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: F6Y16_RS06395
• Genome accession: NZ_AP020318
• Coordinates: 1255748..1256830 (-)
• Length: 360 a.a.
• NCBI ID: WP_001548033.1
• Uniprot ID: A0A0H2XJ41
• Organism: Staphylococcus aureus strain KUH180038
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1250748..1261830

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F6Y16_RS06375	-	1251357..1251461 (-)	105	WP_001790092.1	hypothetical protein	-
F6Y16_RS06380 (KUH180038_1185)	secA	1251503..1254034 (-)	2532	WP_000506531.1	preprotein translocase subunit SecA	-
F6Y16_RS06385 (KUH180038_1186)	hpf	1254448..1255020 (-)	573	WP_000617735.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
F6Y16_RS06390 (KUH180038_1187)	-	1255081..1255755 (-)	675	WP_001057965.1	ComF family protein	-
F6Y16_RS06395 (KUH180038_1188)	comFA	1255748..1256830 (-)	1083	WP_001548033.1	DEAD/DEAH box helicase	Machinery gene
F6Y16_RS06400 (KUH180038_1189)	fakB1	1257194..1258060 (-)	867	WP_000686342.1	fatty acid kinase binding subunit FakB1	-
F6Y16_RS06405 (KUH180038_1190)	-	1258204..1258845 (+)	642	WP_000192947.1	YigZ family protein	-
F6Y16_RS06410 (KUH180038_1191)	-	1259015..1260070 (-)	1056	WP_000258151.1	glycosyltransferase family 4 protein	-
F6Y16_RS06415 (KUH180038_1192)	gdpS	1260388..1261458 (+)	1071	WP_000460983.1	GGDEF domain-containing protein GdpS	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42111.65 Da
• Isoelectric Point: 9.8307

>NTDB_id=63594 F6Y16_RS06395 WP_001548033.1 1255748..1256830(-) (comFA) [Staphylococcus aureus strain KUH180038]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRKRQTILLYAVTGAGKTEMMFQGIQYARIQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSRQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKNLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNKKIQKMLYRILQDQINNQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQRMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=63594 F6Y16_RS06395 WP_001548033.1 1255748..1256830(-) (comFA) [Staphylococcus aureus strain KUH180038]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAAAGAGACAAACGATTTTGTTATATGCCGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGAATACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGACAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAATTTACAACAAGCATTGAAGTCATCTTCTAAA
GTTGAACATGCAACAATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGTTATTTCAAACTTAATAATAAGAAGATTCAGA
AAATGTTATACCGAATTTTACAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATACGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACATTTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGGGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAG
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (215-318)

• Type III restriction enzyme, res subunit (ResIII) (25-173)

3D structure

• AlphaFold DB: A0A0H2XJ41

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	38.938	94.167	0.367