Detailed information NTG0635753

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: PALA12_RS25715
• Genome accession: NZ_CP106681
• Coordinates: 5560118..5561143 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain PALA12
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5555118..5566143

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PALA12_RS25690 (PALA12_05087)	aroE	5555320..5556144 (-)	825	WP_023083578.1	shikimate dehydrogenase	-
PALA12_RS25695 (PALA12_05088)	hemF	5556202..5557119 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
PALA12_RS25700 (PALA12_05089)	-	5557310..5558287 (+)	978	WP_023083579.1	NADPH:quinone reductase	-
PALA12_RS25705 (PALA12_05090)	-	5558297..5558854 (-)	558	WP_016561457.1	L-threonylcarbamoyladenylate synthase	-
PALA12_RS25710 (PALA12_05091)	dprA	5558895..5559983 (-)	1089	WP_003118479.1	DNA-processing protein DprA	Machinery gene
PALA12_RS25715 (PALA12_05092)	tsaP	5560118..5561143 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
PALA12_RS25720 (PALA12_05093)	def	5561282..5561788 (+)	507	WP_003107059.1	peptide deformylase	-
PALA12_RS25725 (PALA12_05094)	fmt	5561843..5562787 (+)	945	WP_010793609.1	methionyl-tRNA formyltransferase	-
PALA12_RS25730 (PALA12_05095)	rsmB	5562784..5564088 (+)	1305	WP_003122291.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
PALA12_RS25735 (PALA12_05096)	trkA	5564115..5565488 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
PALA12_RS25740 (PALA12_05097)	-	5565637..5565954 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=635753 PALA12_RS25715 WP_003097294.1 5560118..5561143(-) (tsaP) [Pseudomonas aeruginosa strain PALA12]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=635753 PALA12_RS25715 WP_003097294.1 5560118..5561143(-) (tsaP) [Pseudomonas aeruginosa strain PALA12]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCACATCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393