Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   N7980_RS12185 Genome accession   NZ_CP106671
Coordinates   2386462..2387730 (-) Length   422 a.a.
NCBI ID   WP_072174245.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM116301     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2381462..2392730
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N7980_RS12180 (N7980_12180) proS 2384735..2386429 (-) 1695 WP_003231918.1 proline--tRNA ligase -
  N7980_RS12185 (N7980_12185) eeP 2386462..2387730 (-) 1269 WP_072174245.1 RIP metalloprotease RseP Regulator
  N7980_RS12190 (N7980_12190) dxr 2387737..2388888 (-) 1152 WP_003245155.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  N7980_RS12195 (N7980_12195) cdsA 2388950..2389759 (-) 810 WP_072174243.1 phosphatidate cytidylyltransferase -
  N7980_RS12200 (N7980_12200) uppS 2389763..2390545 (-) 783 WP_003231925.1 isoprenyl transferase -
  N7980_RS12205 (N7980_12205) frr 2390676..2391233 (-) 558 WP_003231927.1 ribosome recycling factor -
  N7980_RS12210 (N7980_12210) pyrH 2391235..2391957 (-) 723 WP_003220923.1 UMP kinase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46680.43 Da        Isoelectric Point: 5.0764

>NTDB_id=635353 N7980_RS12185 WP_072174245.1 2386462..2387730(-) (eeP) [Bacillus subtilis strain SRCM116301]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKEDQVEKVIINQKEKYPDALVIEVETADLEHDMKITGYEQGKEDELSSFTVSETSFFIVDGEEVQIAPYN
RQFGSKPVWQRIKAIAAGPIMNFILAYVILVMLGLIQGVPSNEPMLGQLTDNGRAAEAGLKEGDYIQSINGEKMRSWTDI
VSAVKENPEKEMDVAVKRANKTLHISVTPEAVKDENKKTIGRFGSYAPTEKGVLSAVAYGATSTVDIGNQILETFGNLVT
GQFKINMLAGPVGIYDMTDQVAKTGLVNLVRFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINREKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=635353 N7980_RS12185 WP_072174245.1 2386462..2387730(-) (eeP) [Bacillus subtilis strain SRCM116301]
ATGTTCGTGAATACAGTTATAGCGTTTATCATTATTTTCGGAACGCTCGTTTTCTTCCATGAACTGGGCCATTTATTGCT
AGCCCAAAGAGCGGGAATTCTCTGCCGTGAATTTGCGATCGGCTTCGGTCCAAAGATTTTTTCTTTCAAAAAAAATGAAA
CAGTTTATACGATCAGGCTGCTTCCGGTCGGCGGATTTGTTCGTATGGCCGGCGAAGATCCGGAAATGATTGAGGTGAAA
CCCGGATACACGGTCGGGCTTCTGTTTAATAAGGAAGATCAAGTTGAGAAAGTCATCATCAATCAAAAGGAAAAATATCC
GGATGCTTTAGTCATTGAAGTGGAAACAGCGGATCTAGAGCATGACATGAAGATCACCGGTTATGAACAGGGGAAAGAGG
ACGAACTTTCCAGCTTTACTGTCAGCGAAACATCCTTTTTTATTGTAGACGGAGAAGAAGTGCAGATTGCGCCGTATAAT
CGCCAATTTGGTTCCAAACCTGTGTGGCAGCGGATTAAAGCAATTGCTGCAGGGCCGATTATGAACTTTATTTTAGCTTA
CGTCATTTTAGTGATGCTTGGGCTGATTCAAGGCGTACCGTCAAATGAACCTATGCTCGGGCAGCTGACAGACAATGGAC
GGGCAGCTGAAGCAGGGCTAAAAGAAGGGGATTATATCCAAAGCATTAACGGAGAGAAAATGAGGTCTTGGACTGACATT
GTCTCCGCTGTAAAAGAAAACCCGGAGAAAGAAATGGACGTTGCAGTAAAAAGAGCTAACAAAACGCTTCATATTTCGGT
GACTCCGGAAGCTGTTAAAGATGAGAACAAAAAAACAATCGGCCGCTTTGGTTCTTACGCGCCAACTGAGAAAGGCGTTC
TCTCAGCAGTTGCTTACGGCGCGACATCAACAGTTGACATTGGCAATCAAATCTTAGAAACGTTTGGTAATTTAGTAACA
GGACAATTTAAAATAAATATGTTGGCGGGACCAGTTGGTATTTATGATATGACAGACCAAGTGGCGAAAACCGGGTTAGT
TAATTTGGTTCGTTTCGCTGCGTTTTTAAGCATTAATCTTGGGATTGTCAACCTGCTTCCGATTCCGGCACTTGACGGAG
GAAGACTGTTGTTTCTATTTATTGAAGCGATTCGGGGCAAACCGATTAACAGGGAAAAAGAAGCATTTGTTGTGTTTATC
GGAGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGGCTGTTTTTGTAA

Domains

Predicted by InterProScan.

Peptidase family M50 (Peptidase_M50)

(8-408)

PDZ domain (PDZ_6)

(212-258)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.171

100

0.403
  eeP Streptococcus thermophilus LMG 18311

39.302

100

0.4