Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   N7980_RS11465 Genome accession   NZ_CP106671
Coordinates   2185959..2186576 (+) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain SRCM116301     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2180959..2191576
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N7980_RS11430 (N7980_11430) ynzD 2181201..2181374 (+) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  N7980_RS11435 (N7980_11435) yneF 2181448..2181666 (-) 219 WP_003221221.1 YneF family protein -
  N7980_RS11440 (N7980_11440) sirA 2181752..2182198 (-) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  N7980_RS11445 (N7980_11445) recP/tkt 2182351..2184354 (-) 2004 WP_003231593.1 transketolase Machinery gene
  N7980_RS11450 (N7980_11450) ynzC 2184523..2184756 (-) 234 WP_003231595.1 DUF896 domain-containing protein -
  N7980_RS11455 (N7980_11455) dinL 2184820..2185473 (-) 654 WP_041850785.1 recombinase family protein -
  N7980_RS11460 (N7980_11460) yneA 2185492..2185809 (-) 318 WP_003231598.1 cell division suppressor protein YneA -
  N7980_RS11465 (N7980_11465) dinR/lexA 2185959..2186576 (+) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  N7980_RS11470 (N7980_11470) - 2186947..2187205 (-) 259 Protein_2256 hypothetical protein -
  N7980_RS11475 (N7980_11475) fosM 2187114..2187548 (-) 435 WP_032725818.1 FosM family fosfomycin resistance protein -
  N7980_RS11480 (N7980_11480) - 2187757..2188206 (+) 450 WP_015483284.1 YndM family protein -
  N7980_RS11485 (N7980_11485) pghL 2188233..2188991 (-) 759 WP_041850786.1 gamma-polyglutamate hydrolase PghL -
  N7980_RS11490 (N7980_11490) - 2189215..2189529 (-) 315 WP_166668700.1 hypothetical protein -
  N7980_RS11495 (N7980_11495) yndJ 2189619..2191259 (-) 1641 WP_038827863.1 YndJ family protein -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=635347 N7980_RS11465 WP_003238209.1 2185959..2186576(+) (dinR/lexA) [Bacillus subtilis strain SRCM116301]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=635347 N7980_RS11465 WP_003238209.1 2185959..2186576(+) (dinR/lexA) [Bacillus subtilis strain SRCM116301]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACACACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1