Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   LTK15_RS01405 Genome accession   NZ_CP089154
Coordinates   260129..261172 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain UNC_SaCF36     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 255129..266172
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LTK15_RS01375 (LTK15_01375) - 255809..255918 (+) 110 Protein_261 hypothetical protein -
  LTK15_RS01380 (LTK15_01380) - 255947..256360 (+) 414 WP_001622129.1 hypothetical protein -
  LTK15_RS01385 (LTK15_01385) - 256538..257524 (-) 987 WP_000999713.1 aromatic acid exporter family protein -
  LTK15_RS01390 (LTK15_01390) map 258055..258813 (+) 759 WP_000636137.1 type I methionyl aminopeptidase -
  LTK15_RS01395 (LTK15_01395) - 259030..259416 (+) 387 WP_001110184.1 hypothetical protein -
  LTK15_RS01400 (LTK15_01400) liaF 259431..260132 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  LTK15_RS01405 (LTK15_01405) vraS 260129..261172 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  LTK15_RS01410 (LTK15_01410) vraR 261162..261791 (+) 630 WP_086040686.1 two-component system response regulator VraR Regulator
  LTK15_RS01415 (LTK15_01415) - 261904..263121 (-) 1218 WP_000037083.1 YihY/virulence factor BrkB family protein -
  LTK15_RS01420 (LTK15_01420) - 263399..263674 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  LTK15_RS01425 (LTK15_01425) - 263681..264145 (-) 465 WP_000228668.1 low molecular weight protein-tyrosine-phosphatase -
  LTK15_RS01430 (LTK15_01430) - 264292..264492 (+) 201 WP_000180459.1 DUF1128 family protein -
  LTK15_RS01435 (LTK15_01435) - 264504..265751 (+) 1248 WP_232044296.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=635347 LTK15_RS01405 WP_001017131.1 260129..261172(+) (vraS) [Staphylococcus aureus strain UNC_SaCF36]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=635347 LTK15_RS01405 WP_001017131.1 260129..261172(+) (vraS) [Staphylococcus aureus strain UNC_SaCF36]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTACCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTCGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1