Detailed information NTG0635314

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: LRO88_RS14225
• Genome accession: NZ_CP089148
• Coordinates: 2600695..2603025 (-)
• Length: 776 a.a.
• NCBI ID: WP_159376963.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain NIB353
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2595695..2608025

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LRO88_RS14190	yqxA	2596032..2596370 (-)	339	WP_032726189.1	YqxA family protein	-
LRO88_RS14195	spoIIP	2596387..2597592 (-)	1206	WP_014477383.1	spore autolysin SpoIIP	-
LRO88_RS14200	gpr	2597655..2598761 (-)	1107	WP_014480309.1	GPR endopeptidase	-
LRO88_RS14205	rpsT	2598965..2599231 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
LRO88_RS14210	holA	2599246..2600289 (-)	1044	WP_159376962.1	DNA polymerase III subunit delta	-
LRO88_RS14215	-	2600329..2600442 (-)	114	WP_134975484.1	hypothetical protein	-
LRO88_RS14220	yqzM	2600519..2600653 (+)	135	WP_003229983.1	YqzM family protein	-
LRO88_RS14225	comEC	2600695..2603025 (-)	2331	WP_159376963.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LRO88_RS14230	comEB	2603029..2603598 (-)	570	WP_003229978.1	ComE operon protein 2	-
LRO88_RS14235	comEA	2603665..2604282 (-)	618	WP_032726193.1	competence protein ComEA	Machinery gene
LRO88_RS14240	comER	2604366..2605187 (+)	822	WP_159376964.1	late competence protein ComER	-
LRO88_RS14245	yqeM	2605253..2605996 (-)	744	WP_032726197.1	class I SAM-dependent DNA methyltransferase	-
LRO88_RS14250	rsfS	2605993..2606349 (-)	357	WP_014480315.1	ribosome silencing factor	-
LRO88_RS14255	yqeK	2606367..2606927 (-)	561	WP_014480316.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
LRO88_RS14260	nadD	2606917..2607486 (-)	570	WP_004398676.1	nicotinate-nucleotide adenylyltransferase	-
LRO88_RS14265	yhbY	2607498..2607788 (-)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86609.13 Da
• Isoelectric Point: 7.2641

>NTDB_id=635314 LRO88_RS14225 WP_159376963.1 2600695..2603025(-) (comEC) [Bacillus subtilis strain NIB353]
MRNSRLLLPMAAASATAGITAAAYFPAIFLFILFLLIMLIKTRHAFLIIVCFFSFILFFVLYAVTDSQNVSSYRQGTYQF
KAVIDTIPKIDGDRMSMMVKTPDKEKWAAAYRIQSAGEKEQLLYIEPGMSCELTGTLEEPNHATVPGAFDYNEYLYRQHI
HWNYSVTSIQNCSEPENFKYKVLSLRKHIISFTNSLLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHV
GILTAGLFYIIIRLGITREKASILLLLFLPLYVMLTGAAPSVLRAALMAGVYLAGSLVKWRVHSATAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFHQVKTSLGQLTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGA
VAGVLLLSLSASFGRLFFSWFDLLVSWTNRLITNIADVDVFTIMIAHPAPALLFLFTVTIILLLMAIEKRSLSQSMVTGG
ICCAVLFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQHPFSLGEKMLIPFLTAKG
IKQLDALILTHADQDHIGEAEILLKHHKVKRLVIPKGFVSEPKDEKVLQTAREEGVTIEEVKRGDVLQIKDLQFHVLSPE
APDPASKNNSSLVLWMETGGMSWILTGDLEKEGEQEVMNVFPNIKADVLKVGHHGSKGSTGEEFIQQLQPKTAIISAGKN
NRYHHPHQEVLQILQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=635314 LRO88_RS14225 WP_159376963.1 2600695..2603025(-) (comEC) [Bacillus subtilis strain NIB353]
ATGCGTAATTCGCGTTTGTTATTGCCTATGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCCCCGC
TATTTTTCTTTTCATCCTCTTTCTCCTCATCATGTTAATCAAAACGAGGCACGCTTTTCTTATTATTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGTACTGTATGCAGTCACAGATTCTCAGAATGTCTCTTCCTATCGGCAGGGAACCTATCAATTC
AAGGCAGTGATTGACACTATTCCCAAAATTGACGGTGACCGTATGTCTATGATGGTTAAGACACCTGATAAGGAAAAATG
GGCTGCTGCGTATCGCATTCAGTCTGCTGGTGAAAAAGAACAGCTGTTATACATAGAACCAGGAATGTCATGTGAGTTGA
CTGGTACATTGGAAGAACCGAATCACGCAACTGTGCCGGGTGCATTTGATTATAACGAGTATCTTTATCGGCAGCATATT
CATTGGAACTACTCTGTCACGTCTATCCAAAACTGCAGTGAACCTGAAAATTTTAAGTACAAGGTGCTCAGCTTGAGAAA
ACATATCATATCATTCACAAACAGCCTTCTGCCTCCTGATTCGGCAGGAATTGTACAGGCACTTACAGTCGGTGACAGAT
TTTATGTGGAGGACGAAGTGCTTACCGCGTATCAAAAGCTTGGTGTTGTCCATCTCTTGGCGATATCAGGACTCCACGTG
GGGATTTTGACAGCAGGTTTGTTTTATATCATAATCCGTCTTGGTATAACTAGAGAAAAGGCGTCAATTCTGTTGCTGTT
ATTTCTGCCGCTCTATGTGATGTTGACCGGCGCTGCTCCTTCAGTGCTACGCGCCGCTCTCATGGCGGGTGTTTACTTAG
CTGGAAGCCTTGTCAAATGGCGTGTCCACTCTGCAACTGCAATTTGTCTTTCATACATCGTCCTTCTGCTCTTCAATCCT
TATCATCTCTTTGAAGCCGGTTTTCAGCTATCGTTCGCCGTCAGTTTTTCTTTAATTCTATCCTCTTCTATTTTTCATCA
GGTTAAAACCTCCTTGGGGCAGCTGACAATTGTATCACTCATCGCTCAGCTGGGCTCGCTTCCGATTCTCCTATATCATT
TTCATCAGTTTTCTATCATCAGCGTACCGATGAATATGTTGATGGTACCATTTTATACCTTCTGTATTTTGCCGGGAGCT
GTAGCAGGTGTTCTTCTATTAAGTCTTTCCGCTTCGTTTGGGAGATTGTTTTTCAGCTGGTTTGATTTATTGGTAAGCTG
GACCAATAGGCTAATCACAAACATTGCAGATGTTGATGTGTTCACGATTATGATCGCACATCCTGCACCTGCTTTGCTTT
TTTTATTCACGGTCACGATCATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTGTCGCAGTCGATGGTAACCGGAGGC
ATTTGCTGCGCGGTGCTGTTTCTGCTCTTTATATATCCGTGTCTTAGTTCCGAAGGAGAAGTGGATATGATAGATATTGG
ACAGGGTGACAGCATGTTTGTAGGTGCTCCGCATCAGCGGGGTCGTGTCTTAATTGATACCGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGCGAAAAACAGCATCCGTTTTCACTGGGGGAAAAGATGCTGATTCCGTTTTTAACTGCTAAGGGA
ATCAAACAGCTTGACGCTTTAATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGATTCTGCTGAAGCATCA
TAAAGTAAAGCGCCTCGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGATGAGAAAGTGCTGCAGACAGCCAGAGAAG
AGGGAGTGACAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCTGAA
GCACCTGATCCGGCAAGCAAAAATAATTCCTCTCTCGTTCTGTGGATGGAGACGGGCGGTATGAGCTGGATCTTGACGGG
TGATCTGGAGAAAGAAGGGGAACAAGAGGTGATGAACGTGTTTCCGAATATAAAAGCAGATGTCTTAAAGGTGGGGCACC
ATGGGAGCAAAGGCTCTACCGGTGAAGAATTCATCCAACAGCTTCAGCCGAAAACGGCCATTATCTCAGCCGGGAAAAAC
AATCGGTACCATCATCCTCATCAAGAAGTTCTGCAAATATTACAAAGGCATTCTATCCGTGTGCTGCGTACAGATCAAAA
CGGAACGATCCAATATAGATATAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (19-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	97.68	100	0.977