Detailed information NTG0635254

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: B591_RS21910
• Genome accession: NZ_CP106650
• Coordinates: 4969643..4970929 (+)
• Length: 428 a.a.
• NCBI ID: WP_023419466.1
• Uniprot ID: A0A7Y6CBQ7
• Organism: Streptomyces sp. GBA 94-10 4N24 strain GBA 94-10
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4964643..4975929

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B591_RS21880 (B591_21707)	-	4965581..4965775 (+)	195	WP_003948050.1	hypothetical protein	-
B591_RS21895 (B591_21712)	tig	4966431..4967828 (+)	1398	WP_023419464.1	trigger factor	-
B591_RS21900 (B591_21717)	clpP	4968128..4968745 (+)	618	WP_008411883.1	ATP-dependent Clp protease proteolytic subunit	Regulator
B591_RS21905 (B591_21722)	clpP	4968813..4969484 (+)	672	WP_023419465.1	ATP-dependent Clp protease proteolytic subunit	Regulator
B591_RS21910 (B591_21727)	clpX	4969643..4970929 (+)	1287	WP_023419466.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
B591_RS21915 (B591_21732)	-	4971024..4972001 (-)	978	WP_023419467.1	hypothetical protein	-
B591_RS21920 (B591_21737)	-	4972139..4974760 (+)	2622	WP_023419468.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46925.77 Da
• Isoelectric Point: 4.7788

>NTDB_id=635254 B591_RS21910 WP_023419466.1 4969643..4970929(+) (clpX) [Streptomyces sp. GBA 94-10 4N24 strain GBA 94-10]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWDELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGQNGAPGGREDAIELGKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIEARAGAKGIGFGATIRSKREIEEKDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
AEVVQSNVNPTLIPRDARGRGNGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=635254 B591_RS21910 WP_023419466.1 4969643..4970929(+) (clpX) [Streptomyces sp. GBA 94-10 4N24 strain GBA 94-10]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGTCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACCT
CGGAAGTGCGCTGGGACGAACTGCCCAAGCCGCGCGAGATCTACGAGTTCCTGGAGAGCTACGTCGTGGGCCAGGAGCCC
GCGAAGAAGGCGCTCTCCGTCGCGGTGTACAACCACTACAAGCGCGTGCAGGCCGGGCAGAACGGCGCACCCGGCGGGCG
TGAGGACGCCATCGAGCTGGGCAAGTCCAACATCCTGCTGCTGGGCCCGACCGGCTCCGGCAAGACCCTGCTCGCGCAGA
CGCTGGCCCGGATGCTCAACGTGCCGTTCGCCATCGCGGACGCCACGGCGCTGACCGAGGCAGGCTACGTCGGCGAGGAT
GTCGAGAACATCCTCCTCAAGCTCATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
TGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGACGTCTCCGGCGAGGGCGTCCAGCAGGCGC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCGGTGCCGCCGCAGGGCGGGCGGAAACACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCCGGTCTGGAGAAGATCATCGAGGCGCGGGCCGGCGC
CAAGGGCATCGGGTTCGGCGCCACGATCCGCTCCAAGCGGGAGATCGAGGAGAAGGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTGCCGGTCATCACCTCGGTCCACAACCTCGACCGC
GAGGCGCTCCTCCAGATCCTCATCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGTGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCATGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACC
GCCGAGGTCGTCCAGTCCAACGTCAACCCGACCCTGATCCCCCGGGACGCCCGGGGCCGGGGAAACGGCGAGCAGAAGTC
GGCCTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-396)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0A7Y6CBQ7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.779	94.159	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521