Detailed information NTG0635155

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: N8E87_RS00200
• Genome accession: NZ_CP104917
• Coordinates: 43074..44492 (+)
• Length: 472 a.a.
• NCBI ID: WP_264245189.1
• Uniprot ID: -
• Organism: Avibacterium paragallinarum strain AP-2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 38074..49492

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N8E87_RS00180 (N8E87_00180)	-	39323..40492 (+)	1170	WP_264245183.1	bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN	-
N8E87_RS00185 (N8E87_00185)	pilF/pilF2	40526..41068 (+)	543	WP_017805302.1	type IV pilus biogenesis/stability protein PilW	Machinery gene
N8E87_RS00190 (N8E87_00190)	dprA	41213..42313 (+)	1101	WP_264245186.1	DNA-processing protein DprA	Machinery gene
N8E87_RS00195 (N8E87_00195)	rsmD	42310..42918 (-)	609	WP_264245187.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
N8E87_RS00200 (N8E87_00200)	pilA	43074..44492 (+)	1419	WP_264245189.1	signal recognition particle-docking protein FtsY	Machinery gene
N8E87_RS00205 (N8E87_00205)	glpQ	45050..46144 (-)	1095	WP_264245191.1	glycerophosphodiester phosphodiesterase	-
N8E87_RS00210 (N8E87_00210)	glpT	46238..47683 (-)	1446	WP_017807318.1	glycerol-3-phosphate transporter	-

Sequence

Protein

• Length: 472 a.a.
• Molecular weight: 52038.39 Da
• Isoelectric Point: 4.3002

>NTDB_id=635155 N8E87_RS00200 WP_264245189.1 43074..44492(+) (pilA) [Avibacterium paragallinarum strain AP-2]
MAEKNKKGGFWSWFGLGKKEEEAVEPSLLQENAEEINVSQTEIPSEQSAVENPQDFEQETESLTQTDITPEQSAVENPQG
FVQETESVTQTEITAEQSAVENSQGFEQETETLTQAEISSEQSAVENPQDFEQETESLTQTDITPEQSAVENPQPAEKEK
PSKGGFFSRLVKGLIRTKQNIGSGFLSLFSGKKIDDDLFEELEEQLLIADIGMPTTTKIINNLTQHASRKQLKEADLLYQ
QLKAELANIIKPVAQPLQIDSSKKPYVILMVGVNGVGKTTTIGKLARQFQMQGKSVMLAAGDTFRAAAVEQLQVWGERNH
IPVIAQNTGADSASVIYDAMQSAAARNIDILIADTAGRLQNKNNLMDELKKIVRVMKKYDETAPHEIMLTLDAGTGQNAI
SQAKLFHEAVELTGISLTKLDGTAKGGVIFAIADQFKLPIRYIGIGEKIEDLRPFQAEEFIEALFSKELETQ

Nucleotide

• Length: 1419 bp

>NTDB_id=635155 N8E87_RS00200 WP_264245189.1 43074..44492(+) (pilA) [Avibacterium paragallinarum strain AP-2]
ATGGCAGAAAAAAATAAAAAAGGCGGATTTTGGTCTTGGTTTGGCTTAGGTAAAAAGGAAGAAGAAGCGGTAGAGCCTAG
TTTATTGCAAGAAAATGCGGAAGAAATCAACGTTTCACAAACAGAAATCCCCTCAGAACAAAGTGCGGTAGAAAATCCGC
AAGATTTTGAGCAAGAAACGGAAAGCCTAACGCAAACCGATATCACGCCAGAGCAAAGTGCGGTAGAAAATCCGCAAGGT
TTTGTGCAAGAAACGGAAAGTGTAACGCAAACTGAAATCACAGCAGAGCAAAGTGCGGTGGAAAATTCACAAGGTTTTGA
GCAAGAAACGGAAACTCTAACGCAAGCTGAAATTTCCTCAGAGCAAAGTGCGGTGGAAAATCCGCAAGATTTTGAGCAAG
AAACGGAAAGCCTAACGCAAACCGACATCACGCCAGAGCAAAGTGCGGTAGAAAATCCACAACCCGCTGAGAAAGAAAAA
CCAAGCAAAGGGGGCTTTTTCAGTCGCTTAGTGAAAGGGCTGATTCGTACCAAACAGAATATCGGTTCAGGCTTTTTGAG
CCTATTTTCAGGTAAGAAAATTGATGATGATCTGTTTGAAGAATTAGAAGAACAGTTGCTCATCGCTGATATTGGAATGC
CGACAACAACCAAGATTATCAATAATTTAACTCAACACGCCAGCCGCAAACAGCTAAAAGAGGCAGATTTGTTGTATCAA
CAGCTTAAAGCGGAGCTTGCGAACATTATCAAACCCGTTGCACAACCGCTGCAAATTGATAGCAGCAAAAAGCCTTATGT
GATTTTGATGGTGGGCGTAAATGGCGTGGGCAAAACCACCACCATTGGCAAATTGGCTCGTCAATTCCAAATGCAAGGCA
AATCGGTGATGTTAGCCGCTGGGGATACTTTCCGTGCCGCCGCCGTAGAACAGCTACAAGTGTGGGGGGAACGCAATCAT
ATTCCCGTTATCGCTCAAAACACGGGGGCGGATTCTGCTTCCGTGATTTATGACGCAATGCAATCAGCCGCGGCGAGAAA
TATTGACATTTTAATTGCCGACACCGCAGGGCGTTTGCAAAATAAAAATAACTTAATGGATGAGCTGAAAAAAATCGTGA
GAGTGATGAAAAAATACGATGAAACCGCACCGCACGAAATTATGCTGACTCTTGACGCGGGTACAGGGCAAAACGCTATC
AGCCAAGCGAAATTATTCCACGAAGCCGTAGAGCTAACGGGGATCAGCTTAACGAAACTCGACGGCACGGCAAAAGGTGG
GGTAATTTTCGCCATTGCGGATCAATTTAAATTACCAATTCGCTATATTGGAATCGGCGAAAAAATCGAAGACCTCCGCC
CATTCCAAGCGGAAGAATTTATTGAGGCTTTATTTAGTAAAGAATTGGAAACTCAATAG

Domains

Predicted by InterProScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (182-246)

• SRP54-type protein, GTPase domain (SRP54) (266-465)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	44.258	88.559	0.392