Detailed information NTG0635101

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: N8E86_RS00200
• Genome accession: NZ_CP104914
• Coordinates: 43125..44468 (+)
• Length: 447 a.a.
• NCBI ID: WP_264256083.1
• Uniprot ID: -
• Organism: Avibacterium paragallinarum strain AG21-0333
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 38125..49468

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N8E86_RS00180 (N8E86_00180)	-	39374..40543 (+)	1170	WP_264256081.1	bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN	-
N8E86_RS00185 (N8E86_00185)	pilF/pilF2	40577..41119 (+)	543	WP_017805302.1	type IV pilus biogenesis/stability protein PilW	Machinery gene
N8E86_RS00190 (N8E86_00190)	dprA	41264..42364 (+)	1101	WP_110479718.1	DNA-processing protein DprA	Machinery gene
N8E86_RS00195 (N8E86_00195)	rsmD	42361..42969 (-)	609	WP_264256082.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
N8E86_RS00200 (N8E86_00200)	pilA	43125..44468 (+)	1344	WP_264256083.1	signal recognition particle-docking protein FtsY	Machinery gene
N8E86_RS00205 (N8E86_00205)	glpQ	45014..46108 (-)	1095	WP_264256084.1	glycerophosphodiester phosphodiesterase	-
N8E86_RS00210 (N8E86_00210)	glpT	46202..47647 (-)	1446	WP_046097260.1	glycerol-3-phosphate transporter	-

Sequence

Protein

• Length: 447 a.a.
• Molecular weight: 49286.73 Da
• Isoelectric Point: 4.3885

>NTDB_id=635101 N8E86_RS00200 WP_264256083.1 43125..44468(+) (pilA) [Avibacterium paragallinarum strain AG21-0333]
MAEKNKKGGFWSWFGLGKKEEEAVEPSLLQENVEEINVSQTEIPSEQSAVENPQGFEQEMETLTQAEISSEQSAVENPQG
LEQETESLTQIDITPEQSAVENPQDFEQETESLTQIEITPEQSEAENPQPAEKEKPSKGGFFSRLVKGLIRTKQNIGSGF
LSLFSGKKIDDDLFEELEEQLLIADIGMPTTTKIINNLTQHASRKQLKEADLLYQQLKAELADIIKPVAQPLQIDSSKKP
YVILMVGVNGVGKTTTIGKLARQLQMQGKSVMLAAGDTFRAAAVEQLQVWGERNHIPVIAQNTGADSASVIYDAMQSAAA
RNIDILIADTAGRLQNKNNLMDELKKIVRVMKKYDETAPHEIMLTLDAGTGQNAISQAKLFHEAIGLTGISLTKLDGTAK
GGVIFAIADQFKLPIRYIGIGEKIEDLRPFQAEEFIEALFSKELETQ

Nucleotide

• Length: 1344 bp

>NTDB_id=635101 N8E86_RS00200 WP_264256083.1 43125..44468(+) (pilA) [Avibacterium paragallinarum strain AG21-0333]
ATGGCAGAAAAAAATAAAAAAGGCGGATTTTGGTCTTGGTTTGGCTTAGGTAAAAAGGAAGAAGAAGCGGTAGAGCCTAG
TTTATTGCAAGAAAATGTGGAAGAAATCAACGTTTCACAAACAGAAATCCCCTCAGAACAAAGTGCGGTAGAAAATCCGC
AAGGTTTTGAGCAAGAAATGGAAACTCTAACGCAAGCTGAAATTTCCTCAGAGCAAAGTGCGGTAGAAAATCCGCAAGGT
CTTGAGCAAGAAACGGAAAGCCTAACGCAAATCGACATCACGCCAGAGCAAAGTGCGGTAGAAAACCCGCAAGATTTTGA
GCAAGAAACGGAAAGCCTAACGCAAATCGAAATCACGCCAGAGCAAAGTGAAGCAGAAAATCCACAACCCGCTGAGAAAG
AAAAACCAAGCAAAGGGGGCTTTTTCAGTCGCTTAGTGAAAGGGCTGATTCGTACCAAACAGAATATCGGTTCAGGCTTT
TTGAGCCTATTTTCAGGTAAGAAAATTGATGATGATTTGTTTGAAGAGCTGGAAGAACAGCTATTGATCGCCGATATTGG
AATGCCGACAACAACCAAGATTATCAATAATTTAACTCAACACGCCAGCCGCAAACAGCTAAAAGAGGCAGATTTATTGT
ATCAACAGCTTAAAGCGGAGCTTGCGGACATTATCAAACCCGTTGCACAGCCGCTGCAAATTGATAGCAGCAAAAAGCCT
TATGTGATTTTGATGGTGGGCGTAAATGGCGTGGGCAAAACTACCACCATTGGCAAACTTGCACGTCAATTACAAATGCA
AGGGAAATCCGTGATGTTGGCAGCAGGGGATACTTTCCGTGCCGCCGCCGTAGAACAGCTACAAGTGTGGGGGGAACGCA
ATCATATTCCCGTTATCGCTCAAAACACGGGGGCGGATTCTGCTTCCGTGATTTATGACGCAATGCAATCAGCCGCGGCG
AGAAATATTGACATTTTAATCGCCGATACCGCAGGGCGTTTGCAAAATAAAAATAACTTAATGGACGAGCTGAAAAAAAT
CGTGCGAGTGATGAAAAAATACGATGAAACCGCACCGCACGAAATTATGCTGACCCTTGACGCGGGTACAGGGCAAAACG
CCATTAGCCAAGCGAAATTATTCCACGAAGCCATAGGGCTAACGGGCATTAGCTTAACGAAGCTCGACGGCACAGCAAAA
GGCGGGGTGATTTTCGCCATCGCAGATCAATTTAAATTGCCGATTCGCTATATTGGTATCGGTGAAAAAATTGAAGACCT
CCGTCCATTCCAAGCGGAAGAATTTATCGAAGCTTTATTTAGTAAAGAATTGGAAACTCAATAG

Domains

Predicted by InterProScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (157-221)

• SRP54-type protein, GTPase domain (SRP54) (241-440)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	42.89	97.539	0.418